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  5. GSVIVT01031079001

GSVIVT01031079001


Description : Germin-like protein subfamily 1 member 17 OS=Arabidopsis thaliana


Gene families : OG0000034 (Archaeplastida) Phylogenetic Tree(s): OG0000034_tree ,
OG_05_0000016 (LandPlants) Phylogenetic Tree(s): OG_05_0000016_tree ,
OG_06_0000030 (SeedPlants) Phylogenetic Tree(s): OG_06_0000030_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01031079001
Cluster HCCA: Cluster_97

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00089p00122070 evm_27.TU.AmTr_v1... Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica 0.03 Archaeplastida
AT3G04150 No alias RmlC-like cupins superfamily protein 0.04 Archaeplastida
AT3G04170 No alias RmlC-like cupins superfamily protein 0.04 Archaeplastida
AT3G04180 No alias RmlC-like cupins superfamily protein 0.04 Archaeplastida
AT3G04190 No alias RmlC-like cupins superfamily protein 0.04 Archaeplastida
AT3G04200 No alias RmlC-like cupins superfamily protein 0.09 Archaeplastida
AT3G05950 No alias RmlC-like cupins superfamily protein 0.03 Archaeplastida
AT5G39130 No alias RmlC-like cupins superfamily protein 0.03 Archaeplastida
GSVIVT01000065001 No alias Germin-like protein subfamily 1 member 19 OS=Arabidopsis thaliana 0.06 Archaeplastida
GSVIVT01000069001 No alias Germin-like protein subfamily 1 member 19 OS=Arabidopsis thaliana 0.05 Archaeplastida
GSVIVT01013822001 No alias Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica 0.04 Archaeplastida
GSVIVT01021700001 No alias Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica 0.05 Archaeplastida
GSVIVT01021705001 No alias Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica 0.05 Archaeplastida
GSVIVT01030965001 No alias Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica 0.05 Archaeplastida
GSVIVT01030967001 No alias Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica 0.04 Archaeplastida
GSVIVT01031082001 No alias Germin-like protein subfamily 1 member 20 OS=Arabidopsis thaliana 0.04 Archaeplastida
Gb_00713 No alias Germin-like protein subfamily 3 member 2 OS=Arabidopsis... 0.03 Archaeplastida
Gb_05078 No alias Germin-like protein subfamily 2 member 1 OS=Arabidopsis... 0.03 Archaeplastida
Gb_10685 No alias Putative germin-like protein 3-2 OS=Oryza sativa subsp.... 0.05 Archaeplastida
Gb_18733 No alias Putative germin-like protein 2-1 OS=Oryza sativa subsp.... 0.03 Archaeplastida
Gb_30305 No alias Germin-like protein subfamily 2 member 1 OS=Arabidopsis... 0.03 Archaeplastida
LOC_Os03g48760.1 No alias Putative germin-like protein 3-4 OS=Oryza sativa subsp.... 0.03 Archaeplastida
LOC_Os03g48770.1 No alias Germin-like protein 3-5 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
LOC_Os08g09080.1 No alias Germin-like protein 8-11 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
LOC_Os08g13440.1 No alias Germin-like protein 8-12 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
LOC_Os12g05860.1 No alias Germin-like protein 12-2 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
LOC_Os12g05870.1 No alias Putative germin-like protein 12-3 OS=Oryza sativa subsp.... 0.02 Archaeplastida
MA_10325916g0010 No alias no hits & (original description: none) 0.07 Archaeplastida
MA_10339776g0010 No alias no hits & (original description: none) 0.11 Archaeplastida
MA_10427432g0020 No alias Putative germin-like protein 2-2 OS=Oryza sativa subsp.... 0.02 Archaeplastida
Mp5g16550.1 No alias Germin-like protein 3-6 OS=Oryza sativa subsp. japonica... 0.01 Archaeplastida
Pp3c17_21150V3.1 No alias RmlC-like cupins superfamily protein 0.03 Archaeplastida
Pp3c17_21300V3.1 No alias RmlC-like cupins superfamily protein 0.02 Archaeplastida
Pp3c23_1399V3.1 No alias germin-like protein 5 0.03 Archaeplastida
Pp3c3_16510V3.1 No alias germin-like protein subfamily 2 member 2 precursor 0.02 Archaeplastida
Smo227274 No alias Germin-like protein 1-3 OS=Oryza sativa subsp. japonica 0.03 Archaeplastida
Smo89841 No alias Germin-like protein subfamily T member 2 OS=Arabidopsis thaliana 0.04 Archaeplastida
Solyc01g102895.1.1 No alias Germin-like protein subfamily 1 member 13 OS=Arabidopsis... 0.03 Archaeplastida
Solyc09g090005.1.1 No alias Germin-like protein subfamily 1 member 7 OS=Arabidopsis... 0.03 Archaeplastida
Solyc09g090040.3.1 No alias Germin-like protein subfamily 1 member 7 OS=Arabidopsis... 0.04 Archaeplastida
Zm00001e032937_P001 No alias Germin-like protein 5-1 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Zm00001e040617_P001 No alias Germin-like protein 8-12 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0045735 nutrient reservoir activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0008171 O-methyltransferase activity IEP Neighborhood
MF GO:0010333 terpene synthase activity IEP Neighborhood
MF GO:0016829 lyase activity IEP Neighborhood
MF GO:0016830 carbon-carbon lyase activity IEP Neighborhood
MF GO:0016831 carboxy-lyase activity IEP Neighborhood
MF GO:0016835 carbon-oxygen lyase activity IEP Neighborhood
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Neighborhood
MF GO:0030170 pyridoxal phosphate binding IEP Neighborhood
MF GO:0030599 pectinesterase activity IEP Neighborhood
BP GO:0042545 cell wall modification IEP Neighborhood
BP GO:0045229 external encapsulating structure organization IEP Neighborhood
MF GO:0052689 carboxylic ester hydrolase activity IEP Neighborhood
MF GO:0070279 vitamin B6 binding IEP Neighborhood
BP GO:0071554 cell wall organization or biogenesis IEP Neighborhood
BP GO:0071555 cell wall organization IEP Neighborhood
InterPro domains Description Start Stop
IPR006045 Cupin_1 65 213
No external refs found!