GSVIVT01031115001


Description : Lysine-specific demethylase JMJ25 OS=Arabidopsis thaliana


Gene families : OG0000515 (Archaeplastida) Phylogenetic Tree(s): OG0000515_tree ,
OG_05_0114551 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0092783 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01031115001
Cluster HCCA: Cluster_222

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00058780 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.JUMONJI... 0.05 Archaeplastida
AMTR_s00057p00206860 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.JUMONJI... 0.03 Archaeplastida
Cre10.g446850 No alias RNA biosynthesis.transcriptional activation.JUMONJI... 0.03 Archaeplastida
LOC_Os03g31594.1 No alias histone demethylase (KDM3). transcription factor (JUMONJI) 0.05 Archaeplastida
MA_103030g0010 No alias histone demethylase (KDM3). transcription factor (JUMONJI) 0.05 Archaeplastida
MA_136209g0010 No alias histone demethylase (KDM3). transcription factor (JUMONJI) 0.02 Archaeplastida
MA_8576373g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Pp3c14_6480V3.1 No alias Transcription factor jumonji (jmjC) domain-containing protein 0.04 Archaeplastida
Pp3c17_5410V3.1 No alias transcription factor jumonji (jmjC) domain-containing protein 0.04 Archaeplastida
Pp3c4_21970V3.1 No alias transcription factor jumonji (jmjC) domain-containing protein 0.03 Archaeplastida
Solyc02g078790.4.1 No alias histone demethylase (KDM3). transcription factor (JUMONJI) 0.03 Archaeplastida
Solyc02g082400.4.1 No alias histone demethylase (KDM3). transcription factor (JUMONJI) 0.02 Archaeplastida
Solyc03g083240.4.1 No alias histone demethylase (KDM3). transcription factor (JUMONJI) 0.04 Archaeplastida
Solyc08g065800.1.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc08g065820.3.1 No alias histone demethylase (KDM3). transcription factor (JUMONJI) 0.03 Archaeplastida
Zm00001e023535_P001 No alias histone demethylase (KDM3). transcription factor (JUMONJI) 0.02 Archaeplastida
Zm00001e025393_P001 No alias histone demethylase (KDM3). transcription factor (JUMONJI) 0.06 Archaeplastida
Zm00001e038213_P003 No alias histone demethylase (KDM3). transcription factor (JUMONJI) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP Neighborhood
MF GO:0003689 DNA clamp loader activity IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP Neighborhood
MF GO:0003980 UDP-glucose:glycoprotein glucosyltransferase activity IEP Neighborhood
MF GO:0004197 cysteine-type endopeptidase activity IEP Neighborhood
MF GO:0004198 calcium-dependent cysteine-type endopeptidase activity IEP Neighborhood
MF GO:0004559 alpha-mannosidase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
CC GO:0005663 DNA replication factor C complex IEP Neighborhood
CC GO:0005694 chromosome IEP Neighborhood
BP GO:0006013 mannose metabolic process IEP Neighborhood
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP Neighborhood
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP Neighborhood
BP GO:0006479 protein methylation IEP Neighborhood
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to ER IEP Neighborhood
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP Neighborhood
BP GO:0006904 vesicle docking involved in exocytosis IEP Neighborhood
BP GO:0006996 organelle organization IEP Neighborhood
MF GO:0008094 DNA-dependent ATPase activity IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
MF GO:0008170 N-methyltransferase activity IEP Neighborhood
BP GO:0008213 protein alkylation IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0008276 protein methyltransferase activity IEP Neighborhood
MF GO:0008536 Ran GTPase binding IEP Neighborhood
MF GO:0015923 mannosidase activity IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
MF GO:0016278 lysine N-methyltransferase activity IEP Neighborhood
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Neighborhood
BP GO:0016569 covalent chromatin modification IEP Neighborhood
BP GO:0016570 histone modification IEP Neighborhood
BP GO:0016571 histone methylation IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
BP GO:0018022 peptidyl-lysine methylation IEP Neighborhood
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Neighborhood
BP GO:0018205 peptidyl-lysine modification IEP Neighborhood
BP GO:0022406 membrane docking IEP Neighborhood
CC GO:0030173 integral component of Golgi membrane IEP Neighborhood
CC GO:0031228 intrinsic component of Golgi membrane IEP Neighborhood
CC GO:0031300 intrinsic component of organelle membrane IEP Neighborhood
CC GO:0031301 integral component of organelle membrane IEP Neighborhood
MF GO:0031683 G-protein beta/gamma-subunit complex binding IEP Neighborhood
MF GO:0033170 protein-DNA loading ATPase activity IEP Neighborhood
BP GO:0034968 histone lysine methylation IEP Neighborhood
MF GO:0035251 UDP-glucosyltransferase activity IEP Neighborhood
MF GO:0042054 histone methyltransferase activity IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
MF GO:0044877 protein-containing complex binding IEP Neighborhood
MF GO:0046527 glucosyltransferase activity IEP Neighborhood
BP GO:0048193 Golgi vesicle transport IEP Neighborhood
BP GO:0048278 vesicle docking IEP Neighborhood
BP GO:0051276 chromosome organization IEP Neighborhood
BP GO:0051640 organelle localization IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
CC GO:0098797 plasma membrane protein complex IEP Neighborhood
BP GO:0140029 exocytic process IEP Neighborhood
BP GO:0140056 organelle localization by membrane tethering IEP Neighborhood
InterPro domains Description Start Stop
IPR018866 Znf-4CXXC_R1 119 186
No external refs found!