GSVIVT01031132001

Description : RNA processing.RNA splicing.spliceosome-associated non-snRNP factors.SR30/34 splicing factor

Gene families : OG0001375 (Archaeplastida) Phylogenetic Tree(s): OG0001375_tree ,
OG_05_0001509 (LandPlants) Phylogenetic Tree(s): OG_05_0001509_tree ,
OG_06_0001416 (SeedPlants) Phylogenetic Tree(s): OG_06_0001416_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01031132001
Cluster	HCCA: Cluster_200

Target	Alias	Description	ECC score	Gene Family Method
MA_11621g0010	No alias	SR30/34 RNA splicing factor	0.03	Archaeplastida
MpVg00980.1	No alias	No annotation	0.02	Archaeplastida
Solyc09g075090.1.1	No alias	SR30/34 RNA splicing factor	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0030599	pectinesterase activity	IEP	Neighborhood
BP	GO:0042545	cell wall modification	IEP	Neighborhood
BP	GO:0045229	external encapsulating structure organization	IEP	Neighborhood
BP	GO:0071554	cell wall organization or biogenesis	IEP	Neighborhood
BP	GO:0071555	cell wall organization	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR000504	RRM_dom	9	76
IPR000504	RRM_dom	112	175

External Links

No external refs found!