GSVIVT01031387001

Description : RNA biosynthesis.transcriptional activation.AP2/ERF superfamily.DREB-type transcription factor

Gene families : OG0000003 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000001 (LandPlants) Phylogenetic Tree(s): OG_05_0000001_tree ,
OG_06_0001453 (SeedPlants) Phylogenetic Tree(s): OG_06_0001453_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01031387001
Cluster	HCCA: Cluster_5

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00016p00238800	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
AMTR_s00021p00184450	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AMTR_s00095p00096190	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AT1G06160	ORA59	octadecanoid-responsive Arabidopsis AP2/ERF 59	0.04	Archaeplastida
AT1G15360	WIN1, SHN1	Integrase-type DNA-binding superfamily protein	0.05	Archaeplastida
AT1G50640	ATERF3, ERF3	ethylene responsive element binding factor 3	0.03	Archaeplastida
AT1G63030	ddf2	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT1G64380	No alias	Integrase-type DNA-binding superfamily protein	0.04	Archaeplastida
AT3G23230	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT4G16750	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT4G18450	No alias	Integrase-type DNA-binding superfamily protein	0.05	Archaeplastida
AT4G31060	No alias	Integrase-type DNA-binding superfamily protein	0.05	Archaeplastida
AT4G39780	No alias	Integrase-type DNA-binding superfamily protein	0.05	Archaeplastida
AT5G07310	No alias	Integrase-type DNA-binding superfamily protein	0.05	Archaeplastida
AT5G13330	Rap2.6L	related to AP2 6l	0.03	Archaeplastida
AT5G25390	SHN2	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT5G50080	ERF110	ethylene response factor 110	0.03	Archaeplastida
AT5G61890	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
GSVIVT01017572001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01031388001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.06	Archaeplastida
GSVIVT01033793001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.05	Archaeplastida
GSVIVT01036201001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.05	Archaeplastida
Gb_00125	No alias	transcription factor (DREB)	0.04	Archaeplastida
Gb_02790	No alias	transcription factor (ERF)	0.04	Archaeplastida
Gb_03783	No alias	transcription factor (ERF)	0.02	Archaeplastida
Gb_07475	No alias	no hits & (original description: none)	0.04	Archaeplastida
Gb_08437	No alias	transcription factor (ERF)	0.02	Archaeplastida
Gb_09495	No alias	transcription factor (ERF). transcription factor (ERN1)	0.02	Archaeplastida
Gb_11793	No alias	transcription factor (DREB)	0.06	Archaeplastida
Gb_16683	No alias	transcription factor (ERF)	0.05	Archaeplastida
Gb_24326	No alias	transcription factor (DREB)	0.02	Archaeplastida
Gb_24329	No alias	transcription factor (DREB)	0.02	Archaeplastida
Gb_26855	No alias	transcription factor (DREB)	0.02	Archaeplastida
Gb_26863	No alias	transcription factor (DREB)	0.02	Archaeplastida
Gb_32995	No alias	Ethylene-responsive transcription factor ERF016...	0.02	Archaeplastida
Gb_38187	No alias	transcription factor (DREB)	0.03	Archaeplastida
Gb_41020	No alias	transcription factor (DREB)	0.02	Archaeplastida
Gb_41836	No alias	transcription factor (ERF)	0.02	Archaeplastida
LOC_Os02g51670.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
LOC_Os04g32620.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
LOC_Os04g44670.1	No alias	transcription factor (DREB)	0.02	Archaeplastida
LOC_Os04g46240.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
LOC_Os05g34730.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
LOC_Os07g42510.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
LOC_Os08g44960.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
LOC_Os11g13840.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_10266433g0010	No alias	transcription factor (ERF)	0.02	Archaeplastida
MA_10432141g0010	No alias	no hits & (original description: none)	0.06	Archaeplastida
MA_15251g0010	No alias	transcription factor (DREB)	0.02	Archaeplastida
MA_179692g0020	No alias	transcription factor (ERF)	0.02	Archaeplastida
MA_214063g0010	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_40338g0010	No alias	Ethylene-responsive transcription factor ERF012...	0.03	Archaeplastida
MA_436575g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_4929994g0010	No alias	transcription factor (ERF)	0.02	Archaeplastida
MA_5730259g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_5979847g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_647924g0010	No alias	transcription factor (DREB)	0.02	Archaeplastida
MA_83118g0010	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_891091g0010	No alias	Ethylene-responsive transcription factor 1A...	0.03	Archaeplastida
MA_8984558g0010	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_957g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_9786598g0010	No alias	transcription factor (ERF)	0.02	Archaeplastida
Mp4g00380.1	No alias	no hits & (original description: none)	0.03	Archaeplastida
Mp6g08690.1	No alias	transcription factor (DREB)	0.04	Archaeplastida
Pp3c17_10170V3.1	No alias	erf domain protein 9	0.02	Archaeplastida
Pp3c21_13130V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Solyc01g067540.2.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc01g090345.1.1	No alias	Ethylene-responsive transcription factor 13...	0.05	Archaeplastida
Solyc01g091760.3.1	No alias	transcription factor (ERF). transcription factor (ERN1)	0.03	Archaeplastida
Solyc02g067020.1.1	No alias	transcription factor (ERF). transcription factor (ERN1)	0.03	Archaeplastida
Solyc02g077370.1.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
Solyc03g005500.1.1	No alias	transcription factor (ERF). transcription factor (DREB)	0.03	Archaeplastida
Solyc03g005520.1.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
Solyc03g006320.1.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc03g095977.1.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
Solyc03g117130.3.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc03g118190.4.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc04g071770.3.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc04g080910.1.1	No alias	transcription factor (DREB)	0.04	Archaeplastida
Solyc05g013540.1.1	No alias	transcription factor (ERF)	0.05	Archaeplastida
Solyc05g051200.1.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
Solyc05g052030.1.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
Solyc08g066660.1.1	No alias	transcription factor (DREB)	0.05	Archaeplastida
Solyc08g078170.1.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc08g078180.1.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc09g066360.1.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc09g089910.1.1	No alias	transcription factor (ERF). transcription factor (DREB)	0.03	Archaeplastida
Solyc11g042580.1.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
Zm00001e000609_P001	No alias	transcription factor (ERF)	0.04	Archaeplastida
Zm00001e003858_P001	No alias	transcription factor (DREB)	0.02	Archaeplastida
Zm00001e007350_P001	No alias	no hits & (original description: none)	0.02	Archaeplastida
Zm00001e014415_P001	No alias	transcription factor (DREB)	0.03	Archaeplastida
Zm00001e014659_P001	No alias	no hits & (original description: none)	0.02	Archaeplastida
Zm00001e019837_P001	No alias	no hits & (original description: none)	0.02	Archaeplastida
Zm00001e022864_P001	No alias	transcription factor (ERF)	0.02	Archaeplastida
Zm00001e024001_P001	No alias	no hits & (original description: none)	0.03	Archaeplastida
Zm00001e031438_P002	No alias	Ethylene-responsive transcription factor RAP2-3...	0.02	Archaeplastida
Zm00001e033790_P001	No alias	transcription factor (ERF)	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000287	magnesium ion binding	IEP	Neighborhood
MF	GO:0003824	catalytic activity	IEP	Neighborhood
MF	GO:0003860	3-hydroxyisobutyryl-CoA hydrolase activity	IEP	Neighborhood
MF	GO:0004497	monooxygenase activity	IEP	Neighborhood
MF	GO:0004499	N,N-dimethylaniline monooxygenase activity	IEP	Neighborhood
MF	GO:0004857	enzyme inhibitor activity	IEP	Neighborhood
MF	GO:0005337	nucleoside transmembrane transporter activity	IEP	Neighborhood
MF	GO:0005506	iron ion binding	IEP	Neighborhood
MF	GO:0010333	terpene synthase activity	IEP	Neighborhood
BP	GO:0015858	nucleoside transport	IEP	Neighborhood
BP	GO:0015931	nucleobase-containing compound transport	IEP	Neighborhood
MF	GO:0015932	nucleobase-containing compound transmembrane transporter activity	IEP	Neighborhood
MF	GO:0016289	CoA hydrolase activity	IEP	Neighborhood
MF	GO:0016491	oxidoreductase activity	IEP	Neighborhood
MF	GO:0016701	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen	IEP	Neighborhood
MF	GO:0016702	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	IEP	Neighborhood
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	Neighborhood
MF	GO:0016709	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	IEP	Neighborhood
MF	GO:0016790	thiolester hydrolase activity	IEP	Neighborhood
MF	GO:0016829	lyase activity	IEP	Neighborhood
MF	GO:0016835	carbon-oxygen lyase activity	IEP	Neighborhood
MF	GO:0016838	carbon-oxygen lyase activity, acting on phosphates	IEP	Neighborhood
MF	GO:0020037	heme binding	IEP	Neighborhood
MF	GO:0043167	ion binding	IEP	Neighborhood
MF	GO:0043169	cation binding	IEP	Neighborhood
MF	GO:0046872	metal ion binding	IEP	Neighborhood
MF	GO:0046906	tetrapyrrole binding	IEP	Neighborhood
MF	GO:0046914	transition metal ion binding	IEP	Neighborhood
MF	GO:0048037	cofactor binding	IEP	Neighborhood
MF	GO:0051213	dioxygenase activity	IEP	Neighborhood
BP	GO:0055114	oxidation-reduction process	IEP	Neighborhood
BP	GO:1901264	carbohydrate derivative transport	IEP	Neighborhood
MF	GO:1901505	carbohydrate derivative transmembrane transporter activity	IEP	Neighborhood
BP	GO:1901642	nucleoside transmembrane transport	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	44	94

External Links

No external refs found!

GSVIVT01031387001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation