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  5. GSVIVT01031461001

GSVIVT01031461001


Description : RNA biosynthesis.transcriptional activation.C2H2 zinc finger transcription factor


Gene families : OG0000103 (Archaeplastida) Phylogenetic Tree(s): OG0000103_tree ,
OG_05_0000039 (LandPlants) Phylogenetic Tree(s): OG_05_0000039_tree ,
OG_06_0000107 (SeedPlants) Phylogenetic Tree(s): OG_06_0000107_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01031461001
Cluster HCCA: Cluster_92

Target Alias Description ECC score Gene Family Method Actions
AT1G02030 No alias C2H2-like zinc finger protein 0.04 Archaeplastida
AT5G03510 No alias C2H2-type zinc finger family protein 0.03 Archaeplastida
LOC_Os02g57790.1 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
MA_23050g0010 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Pp3c18_22010V3.1 No alias C2H2-like zinc finger protein 0.04 Archaeplastida
Solyc05g055500.1.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Solyc09g008440.1.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e019350_P001 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP Neighborhood
CC GO:0000159 protein phosphatase type 2A complex IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
CC GO:0008287 protein serine/threonine phosphatase complex IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
MF GO:0019208 phosphatase regulator activity IEP Neighborhood
MF GO:0019888 protein phosphatase regulator activity IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
MF GO:0033218 amide binding IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
MF GO:0070569 uridylyltransferase activity IEP Neighborhood
MF GO:1901567 fatty acid derivative binding IEP Neighborhood
MF GO:1901681 sulfur compound binding IEP Neighborhood
CC GO:1903293 phosphatase complex IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!