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  5. GSVIVT01031496001

GSVIVT01031496001


Description : RNA biosynthesis.transcriptional activation.MYB superfamily.MYB transcription factor


Gene families : OG0000002 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000002 (LandPlants) Phylogenetic Tree(s): OG_05_0000002_tree ,
OG_06_0000210 (SeedPlants) Phylogenetic Tree(s): OG_06_0000210_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01031496001
Cluster HCCA: Cluster_120

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00137930 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.07 Archaeplastida
AMTR_s00032p00057800 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.05 Archaeplastida
AMTR_s00032p00221670 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.06 Archaeplastida
AMTR_s00036p00107460 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
AMTR_s00037p00177500 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
AMTR_s00038p00183620 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.05 Archaeplastida
AMTR_s00049p00074250 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
AT1G16490 MYB58, ATMYB58 myb domain protein 58 0.02 Archaeplastida
AT1G17950 BW52, ATMYB52, MYB52 myb domain protein 52 0.02 Archaeplastida
AT1G25340 MYB116, AtMYB116 myb domain protein 116 0.02 Archaeplastida
AT1G26780 AtMYB117, LOF1, MYB117 myb domain protein 117 0.03 Archaeplastida
AT1G34670 AtMYB93, MYB93 myb domain protein 93 0.05 Archaeplastida
AT1G35515 MYB8, HOS10 high response to osmotic stress 10 0.03 Archaeplastida
AT1G48000 AtMYB112, MYB112 myb domain protein 112 0.04 Archaeplastida
AT1G63910 MYB103, AtMYB103 myb domain protein 103 0.02 Archaeplastida
AT1G68320 BW62B, BW62C,... myb domain protein 62 0.03 Archaeplastida
AT1G69560 LOF2, MYB105, ATMYB105 myb domain protein 105 0.02 Archaeplastida
AT1G73410 MYB54, ATMYB54 myb domain protein 54 0.06 Archaeplastida
AT1G79180 ATMYB63, MYB63 myb domain protein 63 0.02 Archaeplastida
AT2G47190 MYB2, ATMYB2 myb domain protein 2 0.02 Archaeplastida
AT3G01140 MYB106, NOK, AtMYB106 myb domain protein 106 0.03 Archaeplastida
AT3G08500 AtMYB83, MYB83 myb domain protein 83 0.04 Archaeplastida
AT3G12720 ATY53, ATMYB67, MYB67 myb domain protein 67 0.06 Archaeplastida
AT3G13540 ATMYB5, MYB5 myb domain protein 5 0.02 Archaeplastida
AT3G13890 MYB26, ATMYB26, MS35 myb domain protein 26 0.04 Archaeplastida
AT3G27785 PGA37, ATMYB118, MYB118 myb domain protein 118 0.02 Archaeplastida
AT3G28470 ATMYB35, TDF1 Duplicated homeodomain-like superfamily protein 0.04 Archaeplastida
AT3G48920 MYB45, AtMYB45 myb domain protein 45 0.04 Archaeplastida
AT3G49690 MYB84, RAX3, ATMYB84 myb domain protein 84 0.02 Archaeplastida
AT3G53200 AtMYB27, MYB27 myb domain protein 27 0.04 Archaeplastida
AT4G01680 MYB55, AtMYB55 myb domain protein 55 0.06 Archaeplastida
AT4G09460 MYB6, AtMYB6 myb domain protein 6 0.02 Archaeplastida
AT4G17785 MYB39 myb domain protein 39 0.03 Archaeplastida
AT4G22680 AtMYB85, MYB85 myb domain protein 85 0.02 Archaeplastida
AT4G28110 MYB41, AtMYB41 myb domain protein 41 0.04 Archaeplastida
AT4G33450 ATMYB69, MYB69 myb domain protein 69 0.02 Archaeplastida
AT5G02320 ATMYB3R5, MYB3R-5 myb domain protein 3r-5 0.02 Archaeplastida
AT5G10280 ATMYB64, ATMYB92, MYB92 myb domain protein 92 0.03 Archaeplastida
AT5G11050 MYB64, AtMYB64 myb domain protein 64 0.02 Archaeplastida
AT5G16770 MYB9, AtMYB9 myb domain protein 9 0.05 Archaeplastida
AT5G52600 AtMYB82, MYB82 myb domain protein 82 0.04 Archaeplastida
AT5G54230 MYB49, AtMYB49 myb domain protein 49 0.04 Archaeplastida
AT5G58850 ATMYB119, MYB119 myb domain protein 119 0.02 Archaeplastida
AT5G59780 ATMYB59-1,... myb domain protein 59 0.06 Archaeplastida
AT5G65790 MYB68, ATMYB68 myb domain protein 68 0.03 Archaeplastida
GSVIVT01007981001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.05 Archaeplastida
GSVIVT01010086001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01011447001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01028235001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01032088001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.06 Archaeplastida
GSVIVT01035041001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.07 Archaeplastida
GSVIVT01035463001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.07 Archaeplastida
Gb_00379 No alias transcription factor (MYB) 0.03 Archaeplastida
Gb_01889 No alias transcription factor (MYB) 0.04 Archaeplastida
Gb_02422 No alias transcription factor (MYB) 0.03 Archaeplastida
Gb_03994 No alias transcription factor (MYB) 0.02 Archaeplastida
Gb_05115 No alias transcription factor (MYB) 0.03 Archaeplastida
Gb_09986 No alias transcription factor (MYB) 0.03 Archaeplastida
Gb_13117 No alias transcription factor (MYB) 0.06 Archaeplastida
Gb_20309 No alias transcription factor (MYB) 0.04 Archaeplastida
Gb_22885 No alias transcription factor (MYB) 0.06 Archaeplastida
Gb_29789 No alias transcription factor (MYB) 0.02 Archaeplastida
Gb_36145 No alias transcription factor (MYB) 0.03 Archaeplastida
Gb_40629 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os01g36460.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os01g50110.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os01g50720.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os01g63680.1 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os01g74590.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os02g51799.1 No alias transcription factor (MYB) 0.06 Archaeplastida
LOC_Os03g18480.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os03g25550.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os04g39470.1 No alias transcription factor (MYB). transcriptional key... 0.02 Archaeplastida
LOC_Os04g42950.1 No alias transcription factor (MYB) 0.06 Archaeplastida
LOC_Os04g43680.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os05g35500.1 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os05g46610.1 No alias transcription factor (MYB) 0.05 Archaeplastida
LOC_Os06g02250.1 No alias transcription factor (MYB) 0.06 Archaeplastida
LOC_Os07g31470.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os07g44090.3 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os08g05520.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os08g33660.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os09g01960.1 No alias transcription factor (MYB) 0.05 Archaeplastida
LOC_Os09g24800.1 No alias transcription factor (MYB) 0.07 Archaeplastida
LOC_Os11g03440.1 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os12g03150.1 No alias transcription factor (MYB) 0.05 Archaeplastida
LOC_Os12g07610.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os12g33070.1 No alias transcription factor (MYB) 0.04 Archaeplastida
MA_10157944g0010 No alias transcription factor (MYB) 0.06 Archaeplastida
MA_10429682g0010 No alias transcription factor (MYB) 0.04 Archaeplastida
MA_128244g0010 No alias transcription factor (MYB) 0.05 Archaeplastida
MA_137453g0010 No alias transcription factor (MYB) 0.06 Archaeplastida
MA_139448g0010 No alias transcription factor (MYB) 0.04 Archaeplastida
MA_158319g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_16413g0010 No alias transcription factor (MYB) 0.06 Archaeplastida
MA_173523g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_17672g0010 No alias transcription factor (MYB) 0.07 Archaeplastida
MA_24271g0020 No alias transcription factor (MYB) 0.04 Archaeplastida
MA_31666g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_322432g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_3665g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_37256g0010 No alias transcription factor (MYB) 0.05 Archaeplastida
MA_492415g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_55123g0010 No alias transcription factor (MYB) 0.06 Archaeplastida
MA_64405g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_66255g0010 No alias transcription factor (MYB) 0.05 Archaeplastida
MA_7115g0010 No alias transcription factor (MYB) 0.04 Archaeplastida
MA_79447g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_8464929g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_93127g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_95012g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_9818613g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_9831998g0010 No alias transcription factor (MYB) 0.04 Archaeplastida
Mp5g14610.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Pp3c12_10360V3.1 No alias myb domain protein 105 0.04 Archaeplastida
Pp3c16_9970V3.1 No alias myb domain protein 106 0.02 Archaeplastida
Pp3c25_3170V3.1 No alias myb domain protein 16 0.02 Archaeplastida
Pp3c26_1390V3.1 No alias myb domain protein 55 0.04 Archaeplastida
Pp3c6_9970V3.1 No alias myb domain protein 106 0.04 Archaeplastida
Solyc01g010910.2.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc01g087130.4.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc01g094360.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc01g111500.3.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc02g082040.3.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc02g086690.3.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc02g088190.4.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc02g089190.2.1 No alias transcription factor (MYB) 0.05 Archaeplastida
Solyc02g091980.2.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc03g025870.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc03g059200.2.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc03g116100.3.1 No alias transcription factor (MYB) 0.05 Archaeplastida
Solyc04g056310.3.1 No alias transcription factor (MYB) 0.07 Archaeplastida
Solyc04g074170.3.1 No alias transcription factor (MYB) 0.09 Archaeplastida
Solyc05g048830.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc05g051550.2.1 No alias transcription factor (MYB) 0.08 Archaeplastida
Solyc05g053150.2.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc06g009710.4.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Solyc06g069850.3.1 No alias transcription factor (MYB) 0.05 Archaeplastida
Solyc06g074920.3.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc07g006750.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc07g053240.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc07g054840.4.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc08g076700.1.1 No alias transcription factor (MYB) 0.09 Archaeplastida
Solyc08g076710.3.1 No alias transcription factor (MYB) 0.08 Archaeplastida
Solyc08g079270.3.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc08g081500.3.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc09g090790.3.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc10g005240.3.1 No alias transcription factor (MYB) 0.06 Archaeplastida
Solyc10g005460.3.1 No alias transcription factor (MYB) 0.1 Archaeplastida
Solyc10g005760.3.1 No alias transcription factor (MYB). transcriptional key... 0.02 Archaeplastida
Solyc10g008700.3.1 No alias No annotation 0.04 Archaeplastida
Solyc10g055410.2.1 No alias transcription factor (MYB) 0.05 Archaeplastida
Solyc12g008670.2.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e003407_P001 No alias transcription factor (MYB) 0.07 Archaeplastida
Zm00001e007085_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e007904_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e009831_P001 No alias transcription factor (MYB) 0.06 Archaeplastida
Zm00001e009849_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e012156_P001 No alias No annotation 0.03 Archaeplastida
Zm00001e014925_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e015884_P001 No alias transcription factor (MYB) 0.06 Archaeplastida
Zm00001e016583_P001 No alias transcription factor (MYB) 0.07 Archaeplastida
Zm00001e017428_P003 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e018186_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e020004_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e020044_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e020754_P001 No alias transcription factor (MYB) 0.05 Archaeplastida
Zm00001e024037_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e024322_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e024606_P001 No alias transcription factor (MYB) 0.08 Archaeplastida
Zm00001e024682_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e025724_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e028135_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e029816_P001 No alias transcription factor (MYB) 0.05 Archaeplastida
Zm00001e032298_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e032347_P001 No alias transcription factor (MYB) 0.08 Archaeplastida
Zm00001e034118_P001 No alias transcription factor (MYB) 0.05 Archaeplastida
Zm00001e034214_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e035025_P001 No alias transcription factor (MYB) 0.1 Archaeplastida
Zm00001e035652_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e035993_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e040265_P001 No alias transcription factor (MYB) 0.05 Archaeplastida
Zm00001e040384_P001 No alias transcription factor (MYB) 0.07 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004664 prephenate dehydratase activity IEP Neighborhood
MF GO:0005048 signal sequence binding IEP Neighborhood
MF GO:0005507 copper ion binding IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006558 L-phenylalanine metabolic process IEP Neighborhood
BP GO:0006621 protein retention in ER lumen IEP Neighborhood
BP GO:0008652 cellular amino acid biosynthetic process IEP Neighborhood
BP GO:0009072 aromatic amino acid family metabolic process IEP Neighborhood
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Neighborhood
BP GO:0009094 L-phenylalanine biosynthetic process IEP Neighborhood
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0016836 hydro-lyase activity IEP Neighborhood
BP GO:0032507 maintenance of protein location in cell IEP Neighborhood
MF GO:0033218 amide binding IEP Neighborhood
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP Neighborhood
MF GO:0042277 peptide binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0045185 maintenance of protein location IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046923 ER retention sequence binding IEP Neighborhood
BP GO:0051235 maintenance of location IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0051651 maintenance of location in cell IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0072595 maintenance of protein localization in organelle IEP Neighborhood
BP GO:1901605 alpha-amino acid metabolic process IEP Neighborhood
BP GO:1901607 alpha-amino acid biosynthetic process IEP Neighborhood
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP Neighborhood
BP GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001005 SANT/Myb 14 62
IPR001005 SANT/Myb 69 111
No external refs found!