GSVIVT01031535001

Description : Putative disease resistance RPP13-like protein 1 OS=Arabidopsis thaliana

Gene families : OG0000215 (Archaeplastida) Phylogenetic Tree(s): OG0000215_tree ,
OG_05_0000100 (LandPlants) Phylogenetic Tree(s): OG_05_0000100_tree ,
OG_06_0000046 (SeedPlants) Phylogenetic Tree(s): OG_06_0000046_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01031535001
Cluster	HCCA: Cluster_37

Target	Alias	Description	ECC score	Gene Family Method
GSVIVT01000663001	No alias	Putative disease resistance protein At3g14460...	0.06	Archaeplastida
GSVIVT01001446001	No alias	Putative disease resistance RPP13-like protein 1...	0.07	Archaeplastida
GSVIVT01003817001	No alias	Putative disease resistance RPP13-like protein 1...	0.06	Archaeplastida
GSVIVT01004013001	No alias	Putative disease resistance protein At3g14460...	0.06	Archaeplastida
GSVIVT01013307001	No alias	Putative disease resistance RPP13-like protein 1...	0.05	Archaeplastida
GSVIVT01013512001	No alias	Putative disease resistance protein RGA4 OS=Solanum bulbocastanum	0.06	Archaeplastida
GSVIVT01022856001	No alias	Putative disease resistance RPP13-like protein 1...	0.07	Archaeplastida
GSVIVT01022931001	No alias	Putative disease resistance RPP13-like protein 1...	0.06	Archaeplastida
GSVIVT01022941001	No alias	Putative disease resistance RPP13-like protein 1...	0.05	Archaeplastida
GSVIVT01022962001	No alias	Putative disease resistance protein RGA3 OS=Solanum bulbocastanum	0.05	Archaeplastida
GSVIVT01023011001	No alias	Putative disease resistance RPP13-like protein 1...	0.07	Archaeplastida
GSVIVT01027229001	No alias	Putative disease resistance RPP13-like protein 1...	0.04	Archaeplastida
GSVIVT01027270001	No alias	Putative disease resistance protein At3g14460...	0.04	Archaeplastida
GSVIVT01027276001	No alias	Putative disease resistance RPP13-like protein 1...	0.04	Archaeplastida
GSVIVT01036610001	No alias	Putative disease resistance RPP13-like protein 1...	0.07	Archaeplastida
Solyc09g005290.1.1	No alias	Putative disease resistance protein RGA1 OS=Solanum...	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043531	ADP binding	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0003779	actin binding	IEP	Neighborhood
MF	GO:0015930	glutamate synthase activity	IEP	Neighborhood
BP	GO:0016567	protein ubiquitination	IEP	Neighborhood
MF	GO:0016638	oxidoreductase activity, acting on the CH-NH2 group of donors	IEP	Neighborhood
BP	GO:0032446	protein modification by small protein conjugation	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR002182	NB-ARC	173	302

External Links

No external refs found!

GSVIVT01031535001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation