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  5. GSVIVT01031547001

GSVIVT01031547001


Description : Cell cycle.mitosis and meiosis.metaphase to anaphase transition.Anaphase-Promoting Complex/Cyclosome (APC/C)-dependent ubiquitination.APC/C E2 ubiquitin conjugating protein


Gene families : OG0004120 (Archaeplastida) Phylogenetic Tree(s): OG0004120_tree ,
OG_05_0003961 (LandPlants) Phylogenetic Tree(s): OG_05_0003961_tree ,
OG_06_0005765 (SeedPlants) Phylogenetic Tree(s): OG_06_0005765_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01031547001
Cluster HCCA: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00053p00175140 evm_27.TU.AmTr_v1... Cell cycle.mitosis and meiosis.metaphase to anaphase... 0.06 Archaeplastida
AT1G50490 UBC20 ubiquitin-conjugating enzyme 20 0.03 Archaeplastida
LOC_Os01g16650.1 No alias E2 ubiquitin conjugating protein (APC/C) 0.05 Archaeplastida
Mp3g21700.1 No alias E2 ubiquitin conjugating protein (APC/C) 0.05 Archaeplastida
Pp3c6_12520V3.1 No alias ubiquitin-conjugating enzyme19 0.03 Archaeplastida
Solyc11g065190.3.1 No alias E2 ubiquitin conjugating protein (APC/C) 0.05 Archaeplastida
Zm00001e017345_P001 No alias E2 ubiquitin conjugating protein (APC/C) 0.08 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003779 actin binding IEP Neighborhood
MF GO:0004797 thymidine kinase activity IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0006275 regulation of DNA replication IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006334 nucleosome assembly IEP Neighborhood
BP GO:0008156 negative regulation of DNA replication IEP Neighborhood
BP GO:0009890 negative regulation of biosynthetic process IEP Neighborhood
BP GO:0009892 negative regulation of metabolic process IEP Neighborhood
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
MF GO:0019136 deoxynucleoside kinase activity IEP Neighborhood
MF GO:0019205 nucleobase-containing compound kinase activity IEP Neighborhood
MF GO:0019206 nucleoside kinase activity IEP Neighborhood
MF GO:0030599 pectinesterase activity IEP Neighborhood
BP GO:0031324 negative regulation of cellular metabolic process IEP Neighborhood
BP GO:0031327 negative regulation of cellular biosynthetic process IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
CC GO:0032993 protein-DNA complex IEP Neighborhood
BP GO:0034622 cellular protein-containing complex assembly IEP Neighborhood
BP GO:0034728 nucleosome organization IEP Neighborhood
BP GO:0042545 cell wall modification IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
CC GO:0044815 DNA packaging complex IEP Neighborhood
BP GO:0045005 DNA-dependent DNA replication maintenance of fidelity IEP Neighborhood
BP GO:0045229 external encapsulating structure organization IEP Neighborhood
BP GO:0045934 negative regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0048478 replication fork protection IEP Neighborhood
BP GO:0048519 negative regulation of biological process IEP Neighborhood
BP GO:0048523 negative regulation of cellular process IEP Neighborhood
BP GO:0051052 regulation of DNA metabolic process IEP Neighborhood
BP GO:0051053 negative regulation of DNA metabolic process IEP Neighborhood
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0065003 protein-containing complex assembly IEP Neighborhood
BP GO:0065004 protein-DNA complex assembly IEP Neighborhood
BP GO:0071554 cell wall organization or biogenesis IEP Neighborhood
BP GO:0071555 cell wall organization IEP Neighborhood
BP GO:0071824 protein-DNA complex subunit organization IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
BP GO:0090329 regulation of DNA-dependent DNA replication IEP Neighborhood
BP GO:2000104 negative regulation of DNA-dependent DNA replication IEP Neighborhood
BP GO:2000113 negative regulation of cellular macromolecule biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR000608 UBQ-conjugat_E2 38 172
No external refs found!