AMTR_s00044p00183280 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00044.199

No description available


Gene families : OG0000428 (Archaeplastida) Phylogenetic Tree(s): OG0000428_tree ,
OG_05_0000219 (LandPlants) Phylogenetic Tree(s): OG_05_0000219_tree ,
OG_06_0000090 (SeedPlants) Phylogenetic Tree(s): OG_06_0000090_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00044p00183280
Cluster HCCA: Cluster_183

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00144390 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
AMTR_s00005p00248350 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00021p00029340 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00024p00180210 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00024p00180240 evm_27.TU.AmTr_v1... Protein MAIN-LIKE 2 OS=Arabidopsis thaliana 0.04 Archaeplastida
AMTR_s00043p00212190 evm_27.TU.AmTr_v1... No description available 0.05 Archaeplastida
AMTR_s00054p00054050 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
AMTR_s00141p00067680 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP Neighborhood
BP GO:0009116 nucleoside metabolic process IEP Neighborhood
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
BP GO:1901657 glycosyl compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR019557 AminoTfrase-like_pln_mobile 94 198
IPR019557 AminoTfrase-like_pln_mobile 39 92
No external refs found!