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  5. GSVIVT01031718001

GSVIVT01031718001


Description : RNA biosynthesis.transcriptional activation.bHLH transcription factor


Gene families : OG0001706 (Archaeplastida) Phylogenetic Tree(s): OG0001706_tree ,
OG_05_0001095 (LandPlants) Phylogenetic Tree(s): OG_05_0001095_tree ,
OG_06_0001642 (SeedPlants) Phylogenetic Tree(s): OG_06_0001642_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01031718001
Cluster HCCA: Cluster_107

Target Alias Description ECC score Gene Family Method Actions
AT1G49770 ZOU, RGE1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.05 Archaeplastida
Gb_05232 No alias transcription factor (bHLH) 0.02 Archaeplastida
MA_93736g0010 No alias transcription factor (bHLH) 0.03 Archaeplastida
MA_97786g0010 No alias transcription factor (bHLH) 0.02 Archaeplastida
Pp3c1_8930V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Archaeplastida
Solyc01g020160.1.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc01g107950.2.1 No alias transcription factor (bHLH) 0.05 Archaeplastida
Zm00001e029250_P001 No alias transcription factor (bHLH) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0004721 phosphoprotein phosphatase activity IEP Neighborhood
BP GO:0005984 disaccharide metabolic process IEP Neighborhood
BP GO:0005985 sucrose metabolic process IEP Neighborhood
BP GO:0006720 isoprenoid metabolic process IEP Neighborhood
BP GO:0006721 terpenoid metabolic process IEP Neighborhood
BP GO:0007165 signal transduction IEP Neighborhood
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Neighborhood
BP GO:0008299 isoprenoid biosynthetic process IEP Neighborhood
MF GO:0008483 transaminase activity IEP Neighborhood
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEP Neighborhood
BP GO:0009311 oligosaccharide metabolic process IEP Neighborhood
BP GO:0016114 terpenoid biosynthetic process IEP Neighborhood
MF GO:0016157 sucrose synthase activity IEP Neighborhood
BP GO:0016311 dephosphorylation IEP Neighborhood
MF GO:0016744 transferase activity, transferring aldehyde or ketonic groups IEP Neighborhood
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Neighborhood
BP GO:0035556 intracellular signal transduction IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
InterPro domains Description Start Stop
IPR011598 bHLH_dom 98 141
No external refs found!