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  5. GSVIVT01031759001

GSVIVT01031759001


Description : Vesicle trafficking.autophagosome formation.ATG9-2-18 membrane shuttling complex.ATG2 component


Gene families : OG0005528 (Archaeplastida) Phylogenetic Tree(s): OG0005528_tree ,
OG_05_0004882 (LandPlants) Phylogenetic Tree(s): OG_05_0004882_tree ,
OG_06_0006196 (SeedPlants) Phylogenetic Tree(s): OG_06_0006196_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01031759001
Cluster HCCA: Cluster_226

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00126p00106330 evm_27.TU.AmTr_v1... Vesicle trafficking.autophagosome formation.ATG9-2-18... 0.06 Archaeplastida
AT3G19190 ATATG2, ATG2 autophagy 2 0.12 Archaeplastida
Cre09.g408950 No alias No description available 0.02 Archaeplastida
Gb_39311 No alias component ATG2 of autophagosome ATG9-2-18 membrane... 0.04 Archaeplastida
LOC_Os06g15700.1 No alias component ATG2 of autophagosome ATG9-2-18 membrane... 0.1 Archaeplastida
MA_10433793g0030 No alias component ATG2 of autophagosome ATG9-2-18 membrane... 0.08 Archaeplastida
Mp6g18570.1 No alias component ATG2 of autophagosome ATG9-2-18 membrane... 0.08 Archaeplastida
Pp3c13_15610V3.1 No alias autophagy 2 0.09 Archaeplastida
Zm00001e030944_P001 No alias component ATG2 of autophagosome ATG9-2-18 membrane... 0.07 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004402 histone acetyltransferase activity IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
MF GO:0005244 voltage-gated ion channel activity IEP Neighborhood
MF GO:0005247 voltage-gated chloride channel activity IEP Neighborhood
MF GO:0005253 anion channel activity IEP Neighborhood
MF GO:0005254 chloride channel activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
BP GO:0006473 protein acetylation IEP Neighborhood
BP GO:0006475 internal protein amino acid acetylation IEP Neighborhood
BP GO:0006821 chloride transport IEP Neighborhood
MF GO:0008080 N-acetyltransferase activity IEP Neighborhood
MF GO:0008308 voltage-gated anion channel activity IEP Neighborhood
MF GO:0015108 chloride transmembrane transporter activity IEP Neighborhood
BP GO:0016197 endosomal transport IEP Neighborhood
MF GO:0016407 acetyltransferase activity IEP Neighborhood
MF GO:0016410 N-acyltransferase activity IEP Neighborhood
BP GO:0016482 cytosolic transport IEP Neighborhood
BP GO:0016569 covalent chromatin modification IEP Neighborhood
BP GO:0016570 histone modification IEP Neighborhood
BP GO:0016573 histone acetylation IEP Neighborhood
BP GO:0018205 peptidyl-lysine modification IEP Neighborhood
BP GO:0018393 internal peptidyl-lysine acetylation IEP Neighborhood
BP GO:0018394 peptidyl-lysine acetylation IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
MF GO:0022832 voltage-gated channel activity IEP Neighborhood
CC GO:0030906 retromer, cargo-selective complex IEP Neighborhood
MF GO:0034212 peptide N-acetyltransferase activity IEP Neighborhood
MF GO:0035091 phosphatidylinositol binding IEP Neighborhood
BP GO:0042147 retrograde transport, endosome to Golgi IEP Neighborhood
MF GO:0042393 histone binding IEP Neighborhood
MF GO:0042802 identical protein binding IEP Neighborhood
BP GO:0043543 protein acylation IEP Neighborhood
BP GO:0043631 RNA polyadenylation IEP Neighborhood
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR015412 Autophagy-rel_C 1834 1927
IPR026854 VPS13_N 20 117
No external refs found!