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  5. GSVIVT01031761001

GSVIVT01031761001


Description : RNA biosynthesis.transcriptional activation.B3 superfamily.REM transcription factor


Gene families : OG0000741 (Archaeplastida) Phylogenetic Tree(s): OG0000741_tree ,
OG_05_0001199 (LandPlants) Phylogenetic Tree(s): OG_05_0001199_tree ,
OG_06_0001296 (SeedPlants) Phylogenetic Tree(s): OG_06_0001296_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01031761001
Cluster HCCA: Cluster_186

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00272200 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.B3... 0.04 Archaeplastida
AMTR_s00077p00151100 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.B3... 0.03 Archaeplastida
AT5G42700 No alias AP2/B3-like transcriptional factor family protein 0.12 Archaeplastida
AT5G58280 No alias AP2/B3-like transcriptional factor family protein 0.1 Archaeplastida
GSVIVT01024536001 No alias RNA biosynthesis.transcriptional activation.B3... 0.02 Archaeplastida
Gb_07025 No alias transcription factor (REM) 0.03 Archaeplastida
Gb_35990 No alias transcription factor (REM) 0.06 Archaeplastida
LOC_Os03g08620.1 No alias transcription factor (REM) 0.08 Archaeplastida
MA_430451g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Mp2g08790.1 No alias transcription factor (REM) 0.03 Archaeplastida
Pp3c14_19410V3.1 No alias AP2/B3-like transcriptional factor family protein 0.1 Archaeplastida
Pp3c17_16150V3.1 No alias AP2/B3-like transcriptional factor family protein 0.1 Archaeplastida
Pp3c2_5990V3.1 No alias AP2/B3-like transcriptional factor family protein 0.02 Archaeplastida
Smo413242 No alias No description available 0.02 Archaeplastida
Smo424732 No alias RNA biosynthesis.transcriptional activation.B3... 0.03 Archaeplastida
Solyc04g079130.2.1 No alias transcription factor (REM) 0.05 Archaeplastida
Solyc06g007530.2.1 No alias transcription factor (REM) 0.06 Archaeplastida
Solyc06g034140.3.1 No alias transcription factor (REM) 0.03 Archaeplastida
Zm00001e000624_P003 No alias transcription factor (REM) 0.11 Archaeplastida
Zm00001e020584_P001 No alias transcription factor (REM) 0.05 Archaeplastida
Zm00001e040028_P004 No alias transcription factor (REM) 0.08 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Neighborhood
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0006334 nucleosome assembly IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006471 protein ADP-ribosylation IEP Neighborhood
BP GO:0007034 vacuolar transport IEP Neighborhood
MF GO:0016763 transferase activity, transferring pentosyl groups IEP Neighborhood
CC GO:0032993 protein-DNA complex IEP Neighborhood
BP GO:0034728 nucleosome organization IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
CC GO:0044815 DNA packaging complex IEP Neighborhood
BP GO:0065004 protein-DNA complex assembly IEP Neighborhood
BP GO:0071824 protein-DNA complex subunit organization IEP Neighborhood
InterPro domains Description Start Stop
IPR003340 B3_DNA-bd 130 213
No external refs found!