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  5. GSVIVT01031766001

GSVIVT01031766001


Description : Protein modification.peptide maturation.mitochondrion.PreP organellar peptidasome


Gene families : OG0002837 (Archaeplastida) Phylogenetic Tree(s): OG0002837_tree ,
OG_05_0004802 (LandPlants) Phylogenetic Tree(s): OG_05_0004802_tree ,
OG_06_0007405 (SeedPlants) Phylogenetic Tree(s): OG_06_0007405_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01031766001
Cluster HCCA: Cluster_124

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00126p00013900 evm_27.TU.AmTr_v1... Protein modification.peptide... 0.07 Archaeplastida
Cpa|evm.model.tig00001085.20 No alias Presequence protease 1, chloroplastic/mitochondrial... 0.03 Archaeplastida
Cpa|evm.model.tig00001085.21 No alias Presequence protease 1, chloroplastic/mitochondrial... 0.02 Archaeplastida
Gb_04858 No alias targeting peptid degrading peptidase (PreP) 0.05 Archaeplastida
LOC_Os02g52390.1 No alias targeting peptid degrading peptidase (PreP) 0.05 Archaeplastida
MA_10436583g0010 No alias targeting peptid degrading peptidase (PreP) 0.04 Archaeplastida
MA_10436583g0020 No alias Presequence protease 2, chloroplastic/mitochondrial... 0.03 Archaeplastida
MA_502125g0010 No alias targeting peptid degrading peptidase (PreP) 0.09 Archaeplastida
MA_70588g0010 No alias Presequence protease 1, chloroplastic/mitochondrial... 0.06 Archaeplastida
Pp3c5_3160V3.1 No alias presequence protease 1 0.04 Archaeplastida
Smo152047 No alias Protein modification.peptide... 0.02 Archaeplastida
Solyc01g108600.3.1 No alias targeting peptid degrading peptidase (PreP) 0.06 Archaeplastida
Zm00001e015926_P001 No alias targeting peptid degrading peptidase (PreP) 0.06 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Neighborhood
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003747 translation release factor activity IEP Neighborhood
MF GO:0005381 iron ion transmembrane transporter activity IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
BP GO:0006415 translational termination IEP Neighborhood
BP GO:0006720 isoprenoid metabolic process IEP Neighborhood
BP GO:0006826 iron ion transport IEP Neighborhood
MF GO:0008079 translation termination factor activity IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
BP GO:0008299 isoprenoid biosynthetic process IEP Neighborhood
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
BP GO:0022411 cellular component disassembly IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
BP GO:0032984 protein-containing complex disassembly IEP Neighborhood
BP GO:0034755 iron ion transmembrane transport IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
BP GO:0043624 cellular protein complex disassembly IEP Neighborhood
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR013578 Peptidase_M16C_assoc 584 833
IPR007863 Peptidase_M16_C 319 506
IPR011765 Pept_M16_N 154 229
No external refs found!