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  5. AMTR_s00044p00196010

AMTR_s00044p00196010 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00044.212

Description : Disease resistance protein RPM1 OS=Arabidopsis thaliana


Gene families : OG0000088 (Archaeplastida) Phylogenetic Tree(s): OG0000088_tree ,
OG_05_0000027 (LandPlants) Phylogenetic Tree(s): OG_05_0000027_tree ,
OG_06_0000027 (SeedPlants) Phylogenetic Tree(s): OG_06_0000027_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00044p00196010
Cluster HCCA: Cluster_45

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00263820 evm_27.TU.AmTr_v1... Disease resistance protein RPM1 OS=Arabidopsis thaliana 0.05 Archaeplastida
AMTR_s00006p00263910 evm_27.TU.AmTr_v1... No description available 0.05 Archaeplastida
AMTR_s00006p00263920 evm_27.TU.AmTr_v1... Disease resistance protein RPM1 OS=Arabidopsis thaliana 0.04 Archaeplastida
AMTR_s00058p00097500 evm_27.TU.AmTr_v1... Disease resistance protein RPM1 OS=Arabidopsis thaliana 0.04 Archaeplastida
AMTR_s00061p00111070 evm_27.TU.AmTr_v1... Putative disease resistance protein At1g59780... 0.04 Archaeplastida
AMTR_s00074p00193280 evm_27.TU.AmTr_v1... Disease resistance protein RPM1 OS=Arabidopsis thaliana 0.04 Archaeplastida
AMTR_s00088p00152700 evm_27.TU.AmTr_v1... Disease resistance protein RPM1 OS=Arabidopsis thaliana 0.08 Archaeplastida
AMTR_s00090p00091780 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00148p00037160 evm_27.TU.AmTr_v1... Disease resistance protein RPM1 OS=Arabidopsis thaliana 0.08 Archaeplastida
AT1G58807 No alias Disease resistance protein (CC-NBS-LRR class) family 0.03 Archaeplastida
AT1G59124 No alias Disease resistance protein (CC-NBS-LRR class) family 0.03 Archaeplastida
LOC_Os04g46300.1 No alias Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os06g48520.1 No alias Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os11g12330.1 No alias Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os11g35580.1 No alias Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Solyc04g009110.1.1 No alias Disease resistance protein RPP13 OS=Arabidopsis thaliana... 0.08 Archaeplastida
Solyc04g009690.2.1 No alias Disease resistance protein RPP13 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Solyc07g039410.3.1 No alias Putative disease resistance RPP13-like protein 3... 0.02 Archaeplastida
Solyc07g039420.1.1 No alias Disease resistance protein RPP13 OS=Arabidopsis thaliana... 0.06 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0043531 ADP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR002182 NB-ARC 174 320
No external refs found!