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  5. GSVIVT01031912001

GSVIVT01031912001


No description available


Gene families : OG0000808 (Archaeplastida) Phylogenetic Tree(s): OG0000808_tree ,
OG_05_0000622 (LandPlants) Phylogenetic Tree(s): OG_05_0000622_tree ,
OG_06_0001983 (SeedPlants) Phylogenetic Tree(s): OG_06_0001983_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01031912001
Cluster HCCA: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001331.4 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
Gb_30243 No alias RING-HC-class E3 ligase 0.03 Archaeplastida
LOC_Os12g43930.1 No alias RING-HC-class E3 ligase 0.03 Archaeplastida
Mp8g08340.1 No alias RING-HC-class E3 ligase 0.02 Archaeplastida
Solyc07g063200.3.1 No alias RING-HC-class E3 ligase 0.07 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
BP GO:0009116 nucleoside metabolic process IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Neighborhood
MF GO:0061630 ubiquitin protein ligase activity IEP Neighborhood
MF GO:0061659 ubiquitin-like protein ligase activity IEP Neighborhood
BP GO:1901135 carbohydrate derivative metabolic process IEP Neighborhood
BP GO:1901657 glycosyl compound metabolic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!