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Description : RNA biosynthesis.transcriptional activation.bHLH transcription factor
Gene families : OG0000051 (Archaeplastida) Phylogenetic Tree(s): OG0000051_tree ,
OG_05_0000668 (LandPlants) Phylogenetic Tree(s): OG_05_0000668_tree ,
OG_06_0000736 (SeedPlants) Phylogenetic Tree(s): OG_06_0000736_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: GSVIVT01032055001 | |
| Cluster | HCCA: Cluster_188 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00002p00267570 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.bHLH... | 0.05 | Archaeplastida | |
| AMTR_s00013p00245920 | evm_27.TU.AmTr_v1... | External stimuli response.light.UV-A/blue... | 0.03 | Archaeplastida | |
| AT1G25330 | No alias | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.02 | Archaeplastida | |
| AT2G24260 | LRL1 | LJRHL1-like 1 | 0.03 | Archaeplastida | |
| AT4G09180 | No alias | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.04 | Archaeplastida | |
| LOC_Os02g47660.1 | No alias | transcription factor (bHLH). transcriptional regulator (CIB) | 0.03 | Archaeplastida | |
| LOC_Os03g58330.1 | No alias | transcription factor (bHLH) | 0.04 | Archaeplastida | |
| LOC_Os04g28280.1 | No alias | transcription factor (bHLH). transcriptional regulator (CIB) | 0.04 | Archaeplastida | |
| LOC_Os04g41229.1 | No alias | transcription factor (bHLH) | 0.03 | Archaeplastida | |
| LOC_Os06g08500.1 | No alias | transcription factor (bHLH) | 0.02 | Archaeplastida | |
| MA_105921g0010 | No alias | transcription factor (bHLH). transcriptional regulator (CIB) | 0.05 | Archaeplastida | |
| MA_14417g0020 | No alias | transcription factor (bHLH) | 0.03 | Archaeplastida | |
| MA_158850g0010 | No alias | transcription factor (bHLH) | 0.04 | Archaeplastida | |
| MA_9115341g0010 | No alias | transcription factor (bHLH). transcriptional regulator (CIB) | 0.04 | Archaeplastida | |
| Mpzg01410.1 | No alias | transcription factor (bHLH) | 0.02 | Archaeplastida | |
| Pp3c2_620V3.1 | No alias | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.05 | Archaeplastida | |
| Smo425336 | No alias | RNA biosynthesis.transcriptional activation.bHLH... | 0.02 | Archaeplastida | |
| Smo443113 | No alias | RNA biosynthesis.transcriptional activation.bHLH... | 0.03 | Archaeplastida | |
| Solyc04g077480.3.1 | No alias | transcription factor (bHLH). transcriptional regulator (CIB) | 0.03 | Archaeplastida | |
| Solyc07g005400.3.1 | No alias | transcription factor (bHLH) | 0.03 | Archaeplastida | |
| Solyc09g057710.4.1 | No alias | transcription factor (bHLH). transcriptional regulator (CIB) | 0.04 | Archaeplastida | |
| Solyc12g010170.2.1 | No alias | transcription factor (bHLH) | 0.05 | Archaeplastida | |
| Solyc12g098620.2.1 | No alias | transcription factor (bHLH). transcriptional regulator (CIB) | 0.02 | Archaeplastida | |
| Zm00001e009823_P002 | No alias | transcription factor (bHLH) | 0.02 | Archaeplastida | |
| Zm00001e015045_P002 | No alias | transcription factor (bHLH) | 0.02 | Archaeplastida | |
| Zm00001e021418_P001 | No alias | no hits & (original description: none) | 0.05 | Archaeplastida | |
| Zm00001e030754_P001 | No alias | transcription factor (bHLH) | 0.05 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0046983 | protein dimerization activity | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000145 | exocyst | IEP | Neighborhood |
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | Neighborhood |
| BP | GO:0006464 | cellular protein modification process | IEP | Neighborhood |
| BP | GO:0006810 | transport | IEP | Neighborhood |
| BP | GO:0006887 | exocytosis | IEP | Neighborhood |
| BP | GO:0008037 | cell recognition | IEP | Neighborhood |
| BP | GO:0008150 | biological_process | IEP | Neighborhood |
| BP | GO:0009987 | cellular process | IEP | Neighborhood |
| BP | GO:0016567 | protein ubiquitination | IEP | Neighborhood |
| MF | GO:0016651 | oxidoreductase activity, acting on NAD(P)H | IEP | Neighborhood |
| MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | Neighborhood |
| BP | GO:0022414 | reproductive process | IEP | Neighborhood |
| BP | GO:0032446 | protein modification by small protein conjugation | IEP | Neighborhood |
| BP | GO:0032940 | secretion by cell | IEP | Neighborhood |
| BP | GO:0036211 | protein modification process | IEP | Neighborhood |
| MF | GO:0043565 | sequence-specific DNA binding | IEP | Neighborhood |
| CC | GO:0044448 | cell cortex part | IEP | Neighborhood |
| BP | GO:0046903 | secretion | IEP | Neighborhood |
| BP | GO:0048544 | recognition of pollen | IEP | Neighborhood |
| MF | GO:0050664 | oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor | IEP | Neighborhood |
| BP | GO:0051179 | localization | IEP | Neighborhood |
| BP | GO:0051234 | establishment of localization | IEP | Neighborhood |
| BP | GO:0055085 | transmembrane transport | IEP | Neighborhood |
| CC | GO:0099023 | tethering complex | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR011598 | bHLH_dom | 182 | 228 |
| No external refs found! |