1. Home
  2. Species
  3. Vitis vinifera
  4. Sequence
  5. GSVIVT01032233001

GSVIVT01032233001


Description : Probable starch synthase 4, chloroplastic/amyloplastic OS=Arabidopsis thaliana


Gene families : OG0000161 (Archaeplastida) Phylogenetic Tree(s): OG0000161_tree ,
OG_05_0011266 (LandPlants) Phylogenetic Tree(s): OG_05_0011266_tree ,
OG_06_0013688 (SeedPlants) Phylogenetic Tree(s): OG_06_0013688_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01032233001
Cluster HCCA: Cluster_137

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00033p00039610 evm_27.TU.AmTr_v1... Probable starch synthase 4, chloroplastic/amyloplastic... 0.02 Archaeplastida
Cre13.g579598 No alias Carbohydrate metabolism.starch... 0.03 Archaeplastida
MA_10428935g0010 No alias Probable starch synthase 4, chloroplastic/amyloplastic... 0.02 Archaeplastida
Zm00001e027473_P001 No alias starch synthase (SSIV) 0.02 Archaeplastida
Zm00001e036436_P004 No alias starch synthase (SSI) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003989 acetyl-CoA carboxylase activity IEP Neighborhood
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP Neighborhood
MF GO:0004519 endonuclease activity IEP Neighborhood
MF GO:0004559 alpha-mannosidase activity IEP Neighborhood
MF GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEP Neighborhood
BP GO:0006308 DNA catabolic process IEP Neighborhood
BP GO:0006721 terpenoid metabolic process IEP Neighborhood
BP GO:0006835 dicarboxylic acid transport IEP Neighborhood
BP GO:0008299 isoprenoid biosynthetic process IEP Neighborhood
BP GO:0008610 lipid biosynthetic process IEP Neighborhood
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEP Neighborhood
CC GO:0009317 acetyl-CoA carboxylase complex IEP Neighborhood
BP GO:0015711 organic anion transport IEP Neighborhood
BP GO:0015740 C4-dicarboxylate transport IEP Neighborhood
BP GO:0015743 malate transport IEP Neighborhood
BP GO:0015849 organic acid transport IEP Neighborhood
MF GO:0015923 mannosidase activity IEP Neighborhood
MF GO:0015924 mannosyl-oligosaccharide mannosidase activity IEP Neighborhood
BP GO:0016114 terpenoid biosynthetic process IEP Neighborhood
MF GO:0016421 CoA carboxylase activity IEP Neighborhood
MF GO:0016744 transferase activity, transferring aldehyde or ketonic groups IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016885 ligase activity, forming carbon-carbon bonds IEP Neighborhood
BP GO:0044255 cellular lipid metabolic process IEP Neighborhood
BP GO:0046942 carboxylic acid transport IEP Neighborhood
InterPro domains Description Start Stop
IPR013534 Starch_synth_cat_dom 109 337
IPR001296 Glyco_trans_1 414 576
No external refs found!