GSVIVT01032236001


No description available


Gene families : OG0000387 (Archaeplastida) Phylogenetic Tree(s): OG0000387_tree ,
OG_05_0000366 (LandPlants) Phylogenetic Tree(s): OG_05_0000366_tree ,
OG_06_0003748 (SeedPlants) Phylogenetic Tree(s): OG_06_0003748_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01032236001
Cluster HCCA: Cluster_44

Target Alias Description ECC score Gene Family Method Actions
MA_130754g0010 No alias methylation reader (ECT) 0.03 Archaeplastida
Pp3c10_17810V3.1 No alias evolutionarily conserved C-terminal region 5 0.02 Archaeplastida
Pp3c3_33560V3.1 No alias evolutionarily conserved C-terminal region 5 0.03 Archaeplastida
Solyc01g028860.3.1 No alias methylation reader (ECT) 0.03 Archaeplastida
Solyc01g103540.3.1 No alias methylation reader (ECT) 0.03 Archaeplastida
Solyc12g099090.3.1 No alias methylation reader (ECT) 0.03 Archaeplastida
Zm00001e032894_P001 No alias methylation reader (ECT) 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003678 DNA helicase activity IEP Neighborhood
MF GO:0003887 DNA-directed DNA polymerase activity IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0006364 rRNA processing IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006721 terpenoid metabolic process IEP Neighborhood
BP GO:0006835 dicarboxylic acid transport IEP Neighborhood
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEP Neighborhood
BP GO:0015740 C4-dicarboxylate transport IEP Neighborhood
BP GO:0015743 malate transport IEP Neighborhood
BP GO:0016072 rRNA metabolic process IEP Neighborhood
BP GO:0016114 terpenoid biosynthetic process IEP Neighborhood
MF GO:0016744 transferase activity, transferring aldehyde or ketonic groups IEP Neighborhood
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Neighborhood
BP GO:0031123 RNA 3'-end processing IEP Neighborhood
BP GO:0031124 mRNA 3'-end processing IEP Neighborhood
MF GO:0031625 ubiquitin protein ligase binding IEP Neighborhood
MF GO:0034061 DNA polymerase activity IEP Neighborhood
BP GO:0042254 ribosome biogenesis IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0044085 cellular component biogenesis IEP Neighborhood
MF GO:0044389 ubiquitin-like protein ligase binding IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
MF GO:0140097 catalytic activity, acting on DNA IEP Neighborhood
InterPro domains Description Start Stop
IPR007275 YTH_domain 337 474
No external refs found!