Description : RNA biosynthesis.transcriptional activation.SBP transcription factor
Gene families : OG0000102 (Archaeplastida) Phylogenetic Tree(s): OG0000102_tree ,
OG_05_0000092 (LandPlants) Phylogenetic Tree(s): OG_05_0000092_tree ,
OG_06_0000075 (SeedPlants) Phylogenetic Tree(s): OG_06_0000075_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: GSVIVT01032239001 | |
Cluster | HCCA: Cluster_219 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00106p00142470 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.SBP... | 0.02 | Archaeplastida | |
AMTR_s00106p00144050 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.SBP... | 0.04 | Archaeplastida | |
AT2G33810 | SPL3 | squamosa promoter binding protein-like 3 | 0.04 | Archaeplastida | |
Gb_15605 | No alias | transcription factor (SBP) | 0.03 | Archaeplastida | |
LOC_Os09g32944.1 | No alias | transcription factor (SBP) | 0.04 | Archaeplastida | |
MA_3179g0020 | No alias | transcription factor (SBP) | 0.03 | Archaeplastida | |
Mp1g10020.1 | No alias | transcription factor (SBP) | 0.02 | Archaeplastida | |
Pp3c16_7540V3.1 | No alias | squamosa promoter binding protein-like 8 | 0.02 | Archaeplastida | |
Pp3c25_8630V3.1 | No alias | squamosa promoter binding protein-like 2 | 0.02 | Archaeplastida | |
Pp3c6_6900V3.1 | No alias | squamosa promoter binding protein-like 8 | 0.02 | Archaeplastida | |
Solyc07g062980.4.1 | No alias | transcription factor (SBP) | 0.04 | Archaeplastida | |
Zm00001e025234_P001 | No alias | transcription factor (SBP) | 0.02 | Archaeplastida | |
Zm00001e034537_P001 | No alias | transcription factor (SBP) | 0.02 | Archaeplastida | |
Zm00001e041822_P001 | No alias | transcription factor (SBP) | 0.03 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | Interproscan |
CC | GO:0005634 | nucleus | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000160 | phosphorelay signal transduction system | IEP | Neighborhood |
MF | GO:0003777 | microtubule motor activity | IEP | Neighborhood |
MF | GO:0005215 | transporter activity | IEP | Neighborhood |
BP | GO:0006810 | transport | IEP | Neighborhood |
BP | GO:0006928 | movement of cell or subcellular component | IEP | Neighborhood |
BP | GO:0007018 | microtubule-based movement | IEP | Neighborhood |
BP | GO:0007275 | multicellular organism development | IEP | Neighborhood |
BP | GO:0016042 | lipid catabolic process | IEP | Neighborhood |
MF | GO:0022857 | transmembrane transporter activity | IEP | Neighborhood |
BP | GO:0032501 | multicellular organismal process | IEP | Neighborhood |
BP | GO:0032502 | developmental process | IEP | Neighborhood |
BP | GO:0035556 | intracellular signal transduction | IEP | Neighborhood |
BP | GO:0048856 | anatomical structure development | IEP | Neighborhood |
BP | GO:0051179 | localization | IEP | Neighborhood |
BP | GO:0051234 | establishment of localization | IEP | Neighborhood |
BP | GO:0055085 | transmembrane transport | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR004333 | SBP_dom | 52 | 125 |
No external refs found! |