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  5. GSVIVT01032239001

GSVIVT01032239001


Description : RNA biosynthesis.transcriptional activation.SBP transcription factor


Gene families : OG0000102 (Archaeplastida) Phylogenetic Tree(s): OG0000102_tree ,
OG_05_0000092 (LandPlants) Phylogenetic Tree(s): OG_05_0000092_tree ,
OG_06_0000075 (SeedPlants) Phylogenetic Tree(s): OG_06_0000075_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01032239001
Cluster HCCA: Cluster_219

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00106p00142470 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.SBP... 0.02 Archaeplastida
AMTR_s00106p00144050 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.SBP... 0.04 Archaeplastida
AT2G33810 SPL3 squamosa promoter binding protein-like 3 0.04 Archaeplastida
Gb_15605 No alias transcription factor (SBP) 0.03 Archaeplastida
LOC_Os09g32944.1 No alias transcription factor (SBP) 0.04 Archaeplastida
MA_3179g0020 No alias transcription factor (SBP) 0.03 Archaeplastida
Mp1g10020.1 No alias transcription factor (SBP) 0.02 Archaeplastida
Pp3c16_7540V3.1 No alias squamosa promoter binding protein-like 8 0.02 Archaeplastida
Pp3c25_8630V3.1 No alias squamosa promoter binding protein-like 2 0.02 Archaeplastida
Pp3c6_6900V3.1 No alias squamosa promoter binding protein-like 8 0.02 Archaeplastida
Solyc07g062980.4.1 No alias transcription factor (SBP) 0.04 Archaeplastida
Zm00001e025234_P001 No alias transcription factor (SBP) 0.02 Archaeplastida
Zm00001e034537_P001 No alias transcription factor (SBP) 0.02 Archaeplastida
Zm00001e041822_P001 No alias transcription factor (SBP) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
CC GO:0005634 nucleus IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Neighborhood
MF GO:0003777 microtubule motor activity IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006928 movement of cell or subcellular component IEP Neighborhood
BP GO:0007018 microtubule-based movement IEP Neighborhood
BP GO:0007275 multicellular organism development IEP Neighborhood
BP GO:0016042 lipid catabolic process IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
BP GO:0032501 multicellular organismal process IEP Neighborhood
BP GO:0032502 developmental process IEP Neighborhood
BP GO:0035556 intracellular signal transduction IEP Neighborhood
BP GO:0048856 anatomical structure development IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
InterPro domains Description Start Stop
IPR004333 SBP_dom 52 125
No external refs found!