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  5. GSVIVT01032259001

GSVIVT01032259001


Description : Pentatricopeptide repeat-containing protein At3g42630 OS=Arabidopsis thaliana


Gene families : OG0007087 (Archaeplastida) Phylogenetic Tree(s): OG0007087_tree ,
OG_05_0008508 (LandPlants) Phylogenetic Tree(s): OG_05_0008508_tree ,
OG_06_0010709 (SeedPlants) Phylogenetic Tree(s): OG_06_0010709_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01032259001
Cluster HCCA: Cluster_105

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00044p00151840 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g14190,... 0.03 Archaeplastida
Gb_17788 No alias Pentatricopeptide repeat-containing protein At4g14190,... 0.04 Archaeplastida
Pp3c3_31860V3.1 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.01 Archaeplastida
Pp3c4_3090V3.1 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 162 191
IPR002885 Pentatricopeptide_repeat 54 102
No external refs found!