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  5. GSVIVT01032404001

GSVIVT01032404001


Description : Solute transport.primary active transport.ABC superfamily.ABC1 family.subfamily ABCB transporter


Gene families : OG0001563 (Archaeplastida) Phylogenetic Tree(s): OG0001563_tree ,
OG_05_0007198 (LandPlants) Phylogenetic Tree(s): OG_05_0007198_tree ,
OG_06_0008022 (SeedPlants) Phylogenetic Tree(s): OG_06_0008022_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01032404001
Cluster HCCA: Cluster_137

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000403.92 No alias ABC transporter B family member 25 OS=Oryza sativa... 0.01 Archaeplastida
Cpa|evm.model.tig00021127.70 No alias ABC transporter B family member 25 OS=Oryza sativa... 0.01 Archaeplastida
Cre02.g083354 No alias Solute transport.primary active transport.ABC... 0.02 Archaeplastida
MA_814691g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Smo441803 No alias Solute transport.primary active transport.ABC... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATPase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003747 translation release factor activity IEP Neighborhood
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP Neighborhood
MF GO:0004559 alpha-mannosidase activity IEP Neighborhood
MF GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEP Neighborhood
MF GO:0005516 calmodulin binding IEP Neighborhood
BP GO:0006415 translational termination IEP Neighborhood
BP GO:0006605 protein targeting IEP Neighborhood
BP GO:0006835 dicarboxylic acid transport IEP Neighborhood
MF GO:0008079 translation termination factor activity IEP Neighborhood
MF GO:0009496 plastoquinol--plastocyanin reductase activity IEP Neighborhood
BP GO:0015740 C4-dicarboxylate transport IEP Neighborhood
BP GO:0015743 malate transport IEP Neighborhood
MF GO:0015923 mannosidase activity IEP Neighborhood
MF GO:0015924 mannosyl-oligosaccharide mannosidase activity IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Neighborhood
BP GO:0022411 cellular component disassembly IEP Neighborhood
BP GO:0032984 protein-containing complex disassembly IEP Neighborhood
CC GO:0034357 photosynthetic membrane IEP Neighborhood
BP GO:0034660 ncRNA metabolic process IEP Neighborhood
CC GO:0042651 thylakoid membrane IEP Neighborhood
BP GO:0043624 cellular protein complex disassembly IEP Neighborhood
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Neighborhood
MF GO:0052880 oxidoreductase activity, acting on diphenols and related substances as donors, with copper protein as acceptor IEP Neighborhood
MF GO:0140101 catalytic activity, acting on a tRNA IEP Neighborhood
InterPro domains Description Start Stop
IPR011527 ABC1_TM_dom 118 361
IPR003439 ABC_transporter-like 431 579
No external refs found!