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  5. GSVIVT01032415001

GSVIVT01032415001


Description : RNA biosynthesis.transcriptional activation.AS2/LOB transcription factor


Gene families : OG0000101 (Archaeplastida) Phylogenetic Tree(s): OG0000101_tree ,
OG_05_0000037 (LandPlants) Phylogenetic Tree(s): OG_05_0000037_tree ,
OG_06_0000043 (SeedPlants) Phylogenetic Tree(s): OG_06_0000043_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01032415001
Cluster HCCA: Cluster_122

Target Alias Description ECC score Gene Family Method Actions
AT3G26660 LBD24 LOB domain-containing protein 24 0.05 Archaeplastida
GSVIVT01020353001 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.04 Archaeplastida
GSVIVT01032714001 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.03 Archaeplastida
Gb_16914 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
Gb_19390 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
Gb_21467 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
Gb_38978 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
LOC_Os11g01550.1 No alias transcription factor (AS2/LOB) 0.04 Archaeplastida
LOC_Os12g01550.1 No alias transcription factor (AS2/LOB) 0.04 Archaeplastida
MA_290245g0010 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
Mp1g14500.1 No alias transcription factor (AS2/LOB) 0.04 Archaeplastida
Solyc02g067800.4.1 No alias transcription factor (AS2/LOB) 0.05 Archaeplastida
Solyc02g086480.1.1 No alias transcription factor (AS2/LOB) 0.11 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Neighborhood
MF GO:0001871 pattern binding IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
BP GO:0006855 drug transmembrane transport IEP Neighborhood
MF GO:0015238 drug transmembrane transporter activity IEP Neighborhood
BP GO:0015893 drug transport IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
MF GO:0030247 polysaccharide binding IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
BP GO:0035556 intracellular signal transduction IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
InterPro domains Description Start Stop
IPR004883 LOB 41 137
No external refs found!