- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : evm_27.TU.AmTr_v1.0_scaffold00045.4
Description : Chromatin modification-related protein EAF1 A OS=Arabidopsis thaliana
Gene families : OG0002496 (Archaeplastida) Phylogenetic Tree(s): OG0002496_tree ,
OG_05_0002072 (LandPlants) Phylogenetic Tree(s): OG_05_0002072_tree ,
OG_06_0003303 (SeedPlants) Phylogenetic Tree(s): OG_06_0003303_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AMTR_s00045p00026940 | |
| Cluster | HCCA: Cluster_253 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT3G24880 | No alias | Helicase/SANT-associated, DNA binding protein | 0.04 | Archaeplastida | |
| GSVIVT01028685001 | No alias | Chromatin modification-related protein EAF1 A... | 0.03 | Archaeplastida | |
| Gb_03424 | No alias | component EAF1 of NuA4 histone acetyltransferase complex | 0.04 | Archaeplastida | |
| Gb_31226 | No alias | component EAF1 of NuA4 histone acetyltransferase complex | 0.04 | Archaeplastida | |
| LOC_Os05g51550.1 | No alias | Chromatin modification-related protein EAF1 B... | 0.04 | Archaeplastida | |
| LOC_Os08g08000.1 | No alias | component EAF1 of NuA4 histone acetyltransferase complex | 0.02 | Archaeplastida | |
| MA_31176g0010 | No alias | component EAF1 of NuA4 histone acetyltransferase complex | 0.04 | Archaeplastida | |
| Mp2g02900.1 | No alias | component EAF1 of NuA4 histone acetyltransferase complex | 0.03 | Archaeplastida | |
| Pp3c26_13270V3.1 | No alias | Helicase/SANT-associated, DNA binding protein | 0.03 | Archaeplastida | |
| Pp3c26_13460V3.1 | No alias | Helicase/SANT-associated, DNA binding protein | 0.04 | Archaeplastida | |
| Pp3c26_13463V3.1 | No alias | Helicase/SANT-associated, DNA binding protein | 0.04 | Archaeplastida | |
| Pp3c4_31630V3.1 | No alias | Helicase/SANT-associated, DNA binding protein | 0.02 | Archaeplastida | |
| Pp3c7_10800V3.1 | No alias | Helicase/SANT-associated, DNA binding protein | 0.03 | Archaeplastida | |
| Smo424802 | No alias | Chromatin modification-related protein EAF1 B... | 0.02 | Archaeplastida | |
| Solyc09g060080.4.1 | No alias | component EAF1 of NuA4 histone acetyltransferase complex | 0.02 | Archaeplastida | |
| Zm00001e020520_P002 | No alias | component EAF1 of NuA4 histone acetyltransferase complex | 0.03 | Archaeplastida | |
| Zm00001e026671_P001 | No alias | component EAF1 of NuA4 histone acetyltransferase complex | 0.03 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | Neighborhood |
| MF | GO:0003725 | double-stranded RNA binding | IEP | Neighborhood |
| MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | Neighborhood |
| MF | GO:0004386 | helicase activity | IEP | Neighborhood |
| MF | GO:0004519 | endonuclease activity | IEP | Neighborhood |
| MF | GO:0004521 | endoribonuclease activity | IEP | Neighborhood |
| MF | GO:0004525 | ribonuclease III activity | IEP | Neighborhood |
| MF | GO:0004540 | ribonuclease activity | IEP | Neighborhood |
| MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | Neighborhood |
| MF | GO:0004814 | arginine-tRNA ligase activity | IEP | Neighborhood |
| MF | GO:0005488 | binding | IEP | Neighborhood |
| MF | GO:0005515 | protein binding | IEP | Neighborhood |
| MF | GO:0005524 | ATP binding | IEP | Neighborhood |
| CC | GO:0005777 | peroxisome | IEP | Neighborhood |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | Neighborhood |
| BP | GO:0006420 | arginyl-tRNA aminoacylation | IEP | Neighborhood |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Neighborhood |
| BP | GO:0006996 | organelle organization | IEP | Neighborhood |
| BP | GO:0007031 | peroxisome organization | IEP | Neighborhood |
| MF | GO:0008144 | drug binding | IEP | Neighborhood |
| BP | GO:0016070 | RNA metabolic process | IEP | Neighborhood |
| MF | GO:0016462 | pyrophosphatase activity | IEP | Neighborhood |
| MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | Neighborhood |
| MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | Neighborhood |
| MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | Neighborhood |
| MF | GO:0016891 | endoribonuclease activity, producing 5'-phosphomonoesters | IEP | Neighborhood |
| MF | GO:0016893 | endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | IEP | Neighborhood |
| MF | GO:0017076 | purine nucleotide binding | IEP | Neighborhood |
| MF | GO:0017111 | nucleoside-triphosphatase activity | IEP | Neighborhood |
| BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | Neighborhood |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | Neighborhood |
| MF | GO:0032296 | double-stranded RNA-specific ribonuclease activity | IEP | Neighborhood |
| MF | GO:0032553 | ribonucleotide binding | IEP | Neighborhood |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | Neighborhood |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Neighborhood |
| MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | Neighborhood |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Neighborhood |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Neighborhood |
| MF | GO:0036094 | small molecule binding | IEP | Neighborhood |
| BP | GO:0042254 | ribosome biogenesis | IEP | Neighborhood |
| CC | GO:0042579 | microbody | IEP | Neighborhood |
| BP | GO:0043038 | amino acid activation | IEP | Neighborhood |
| BP | GO:0043039 | tRNA aminoacylation | IEP | Neighborhood |
| MF | GO:0043168 | anion binding | IEP | Neighborhood |
| CC | GO:0043227 | membrane-bounded organelle | IEP | Neighborhood |
| CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | Neighborhood |
| BP | GO:0044085 | cellular component biogenesis | IEP | Neighborhood |
| BP | GO:0046483 | heterocycle metabolic process | IEP | Neighborhood |
| BP | GO:0071840 | cellular component organization or biogenesis | IEP | Neighborhood |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Neighborhood |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Neighborhood |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | Neighborhood |
| MF | GO:0097747 | RNA polymerase activity | IEP | Neighborhood |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | Neighborhood |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | Neighborhood |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Neighborhood |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Neighborhood |
No InterPro domains available for this sequence
| No external refs found! |