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  5. GSVIVT01032538001

GSVIVT01032538001


Description : RNA biosynthesis.transcriptional activation.C2H2 zinc finger transcription factor


Gene families : OG0002972 (Archaeplastida) Phylogenetic Tree(s): OG0002972_tree ,
OG_05_0007500 (LandPlants) Phylogenetic Tree(s): OG_05_0007500_tree ,
OG_06_0009073 (SeedPlants) Phylogenetic Tree(s): OG_06_0009073_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01032538001
Cluster HCCA: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
Gb_16838 No alias C2H2 zinc finger transcription factor 0.05 Archaeplastida
Zm00001e035296_P001 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR000058 Znf_AN1 15 52
IPR000058 Znf_AN1 102 140
No external refs found!