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  5. GSVIVT01032557001

GSVIVT01032557001


Description : AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana


Gene families : OG0000095 (Archaeplastida) Phylogenetic Tree(s): OG0000095_tree ,
OG_05_0000059 (LandPlants) Phylogenetic Tree(s): OG_05_0000059_tree ,
OG_06_0000488 (SeedPlants) Phylogenetic Tree(s): OG_06_0000488_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01032557001
Cluster HCCA: Cluster_188

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00014p00241930 evm_27.TU.AmTr_v1... Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis thaliana 0.05 Archaeplastida
AMTR_s00019p00244830 evm_27.TU.AmTr_v1... AAA-ATPase At3g50940 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00027p00211720 evm_27.TU.AmTr_v1... AAA-ATPase At2g46620 OS=Arabidopsis thaliana 0.04 Archaeplastida
AT3G28520 No alias P-loop containing nucleoside triphosphate hydrolases... 0.03 Archaeplastida
AT3G28540 No alias P-loop containing nucleoside triphosphate hydrolases... 0.06 Archaeplastida
AT3G28580 No alias P-loop containing nucleoside triphosphate hydrolases... 0.04 Archaeplastida
AT3G50930 BCS1 cytochrome BC1 synthesis 0.02 Archaeplastida
GSVIVT01001352001 No alias AAA-ATPase At4g30250 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01010371001 No alias AAA-ATPase At5g17760 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01027397001 No alias AAA-ATPase At2g46620 OS=Arabidopsis thaliana 0.03 Archaeplastida
Gb_16063 No alias AAA-ATPase At2g46620 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os01g19260.1 No alias AAA-ATPase At3g28580 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os01g45450.1 No alias AAA-ATPase At5g17740 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os03g02330.1 No alias AAA-ATPase At2g46620 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os06g48250.1 No alias AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os07g09420.1 No alias AAA-ATPase At3g28580 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os12g24320.1 No alias AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os12g28590.1 No alias AAA-ATPase At3g28580 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os12g44190.1 No alias AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_10067279g0010 No alias AAA-ATPase At5g57480 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_10430798g0010 No alias AAA-ATPase At4g30250 OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_165229g0020 No alias AAA-ATPase At4g25835 OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_1798304g0010 No alias AAA-ATPase At3g28510 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_230170g0010 No alias AAA-ATPase At5g57480 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_344969g0010 No alias AAA-ATPase At4g25835 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_5260g0010 No alias AAA-ATPase At3g28510 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_716242g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Pp3c14_5870V3.1 No alias P-loop containing nucleoside triphosphate hydrolases... 0.03 Archaeplastida
Pp3c1_35560V3.1 No alias P-loop containing nucleoside triphosphate hydrolases... 0.02 Archaeplastida
Smo413949 No alias AAA-ATPase At4g30250 OS=Arabidopsis thaliana 0.02 Archaeplastida
Solyc01g096230.4.1 No alias AAA-ATPase At2g46620 OS=Arabidopsis thaliana... 0.12 Archaeplastida
Solyc02g062550.3.1 No alias Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis... 0.03 Archaeplastida
Solyc02g087540.3.1 No alias AAA-ATPase At3g28510 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Solyc03g033790.4.1 No alias Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis... 0.03 Archaeplastida
Solyc03g033840.4.1 No alias Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis... 0.03 Archaeplastida
Solyc10g007280.4.1 No alias Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis... 0.04 Archaeplastida
Zm00001e003357_P001 No alias AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e006040_P001 No alias AAA-ATPase At3g28580 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e007733_P001 No alias AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana... 0.04 Archaeplastida
Zm00001e008810_P001 No alias AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana... 0.06 Archaeplastida
Zm00001e011416_P001 No alias AAA-ATPase At3g28510 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Zm00001e012527_P001 No alias AAA-ATPase At2g46620 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Zm00001e038158_P001 No alias AAA-ATPase At3g28580 OS=Arabidopsis thaliana... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
MF GO:0030247 polysaccharide binding IEP Neighborhood
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 678 801
IPR003959 ATPase_AAA_core 172 306
IPR025753 AAA_N_dom 79 107
No external refs found!