GSVIVT01032578001

Description : Solute transport.primary active transport.ABC superfamily.ABC1 family.subfamily ABCB transporter

Gene families : OG0000057 (Archaeplastida) Phylogenetic Tree(s): OG0000057_tree ,
OG_05_0000720 (LandPlants) Phylogenetic Tree(s): OG_05_0000720_tree ,
OG_06_0000544 (SeedPlants) Phylogenetic Tree(s): OG_06_0000544_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01032578001

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00010p00254310	evm_27.TU.AmTr_v1...	Solute transport.primary active transport.ABC...	0.03	Archaeplastida
AMTR_s00018p00193820	evm_27.TU.AmTr_v1...	ABC transporter B family member 1 OS=Arabidopsis thaliana	0.02	Archaeplastida
AMTR_s00045p00108620	evm_27.TU.AmTr_v1...	Solute transport.primary active transport.ABC...	0.05	Archaeplastida
AMTR_s00045p00109940	evm_27.TU.AmTr_v1...	Solute transport.primary active transport.ABC...	0.03	Archaeplastida
AMTR_s00056p00132920	evm_27.TU.AmTr_v1...	Solute transport.primary active transport.ABC...	0.04	Archaeplastida
AMTR_s00090p00165440	evm_27.TU.AmTr_v1...	Solute transport.primary active transport.ABC...	0.03	Archaeplastida
AT2G47000	ATPGP4, PGP4, ABCB4, MDR4	ATP binding cassette subfamily B4	0.03	Archaeplastida
AT3G62150	PGP21	P-glycoprotein 21	0.04	Archaeplastida
AT4G01830	PGP5	P-glycoprotein 5	0.03	Archaeplastida
AT4G18050	PGP9	P-glycoprotein 9	0.06	Archaeplastida
AT4G25960	PGP2	P-glycoprotein 2	0.03	Archaeplastida
AT5G46540	PGP7	P-glycoprotein 7	0.03	Archaeplastida
Cpa\|evm.model.tig00000741.4	No alias	ABC transporter B family member 21 OS=Arabidopsis thaliana	0.01	Archaeplastida
GSVIVT01015306001	No alias	Solute transport.primary active transport.ABC...	0.03	Archaeplastida
GSVIVT01017696001	No alias	Solute transport.primary active transport.ABC...	0.03	Archaeplastida
Gb_02468	No alias	subfamily ABCB transporter	0.04	Archaeplastida
Gb_02469	No alias	subfamily ABCB transporter	0.03	Archaeplastida
Gb_07563	No alias	subfamily ABCB transporter	0.05	Archaeplastida
Gb_08616	No alias	subfamily ABCB transporter	0.04	Archaeplastida
Gb_32125	No alias	subfamily ABCB transporter	0.05	Archaeplastida
Gb_33057	No alias	subfamily ABCB transporter	0.07	Archaeplastida
Gb_33058	No alias	subfamily ABCB transporter	0.06	Archaeplastida
LOC_Os05g47500.1	No alias	subfamily ABCB transporter	0.02	Archaeplastida
LOC_Os08g45030.1	No alias	subfamily ABCB transporter	0.03	Archaeplastida
MA_10432922g0010	No alias	subfamily ABCB transporter	0.03	Archaeplastida
MA_10436810g0020	No alias	subfamily ABCB transporter	0.02	Archaeplastida
MA_107576g0010	No alias	subfamily ABCB transporter	0.03	Archaeplastida
MA_79399g0010	No alias	Putative multidrug resistance protein OS=Oryza sativa...	0.03	Archaeplastida
Mp1g26440.1	No alias	subfamily ABCB transporter	0.02	Archaeplastida
Pp3c1_31680V3.1	No alias	ABC transporter family protein	0.02	Archaeplastida
Pp3c1_34680V3.1	No alias	P-glycoprotein 10	0.02	Archaeplastida
Smo123915	No alias	Solute transport.primary active transport.ABC...	0.05	Archaeplastida
Smo410515	No alias	Solute transport.primary active transport.ABC...	0.03	Archaeplastida
Smo92485	No alias	Solute transport.primary active transport.ABC...	0.02	Archaeplastida
Solyc02g087410.4.1	No alias	subfamily ABCB transporter	0.03	Archaeplastida
Solyc03g005860.4.1	No alias	subfamily ABCB transporter	0.04	Archaeplastida
Solyc03g093650.3.1	No alias	subfamily ABCB transporter	0.04	Archaeplastida
Solyc06g009280.1.1	No alias	subfamily ABCB transporter	0.04	Archaeplastida
Solyc06g009290.4.1	No alias	subfamily ABCB transporter	0.04	Archaeplastida
Solyc07g064120.2.1	No alias	subfamily ABCB transporter	0.02	Archaeplastida
Solyc11g067300.2.1	No alias	subfamily ABCB transporter	0.05	Archaeplastida
Solyc11g067310.3.1	No alias	no hits & (original description: none)	0.04	Archaeplastida
Solyc12g098840.3.1	No alias	subfamily ABCB transporter	0.05	Archaeplastida
Zm00001e020070_P001	No alias	subfamily ABCB transporter	0.03	Archaeplastida
Zm00001e028117_P001	No alias	subfamily ABCB transporter	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0008144	drug binding	None	Extended
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATPase activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004497	monooxygenase activity	IEP	Neighborhood
MF	GO:0004499	N,N-dimethylaniline monooxygenase activity	IEP	Neighborhood
MF	GO:0004857	enzyme inhibitor activity	IEP	Neighborhood
MF	GO:0004866	endopeptidase inhibitor activity	IEP	Neighborhood
MF	GO:0004867	serine-type endopeptidase inhibitor activity	IEP	Neighborhood
MF	GO:0005506	iron ion binding	IEP	Neighborhood
MF	GO:0005507	copper ion binding	IEP	Neighborhood
BP	GO:0006629	lipid metabolic process	IEP	Neighborhood
BP	GO:0006778	porphyrin-containing compound metabolic process	IEP	Neighborhood
BP	GO:0006787	porphyrin-containing compound catabolic process	IEP	Neighborhood
BP	GO:0008150	biological_process	IEP	Neighborhood
BP	GO:0008152	metabolic process	IEP	Neighborhood
BP	GO:0009611	response to wounding	IEP	Neighborhood
MF	GO:0010181	FMN binding	IEP	Neighborhood
BP	GO:0015994	chlorophyll metabolic process	IEP	Neighborhood
BP	GO:0015996	chlorophyll catabolic process	IEP	Neighborhood
MF	GO:0016491	oxidoreductase activity	IEP	Neighborhood
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	Neighborhood
MF	GO:0016709	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	IEP	Neighborhood
MF	GO:0020037	heme binding	IEP	Neighborhood
MF	GO:0030234	enzyme regulator activity	IEP	Neighborhood
MF	GO:0030414	peptidase inhibitor activity	IEP	Neighborhood
BP	GO:0033015	tetrapyrrole catabolic process	IEP	Neighborhood
BP	GO:0042440	pigment metabolic process	IEP	Neighborhood
BP	GO:0046149	pigment catabolic process	IEP	Neighborhood
MF	GO:0046906	tetrapyrrole binding	IEP	Neighborhood
MF	GO:0046914	transition metal ion binding	IEP	Neighborhood
MF	GO:0047746	chlorophyllase activity	IEP	Neighborhood
MF	GO:0048037	cofactor binding	IEP	Neighborhood
MF	GO:0050660	flavin adenine dinucleotide binding	IEP	Neighborhood
MF	GO:0050661	NADP binding	IEP	Neighborhood
MF	GO:0050662	coenzyme binding	IEP	Neighborhood
BP	GO:0051187	cofactor catabolic process	IEP	Neighborhood
MF	GO:0052689	carboxylic ester hydrolase activity	IEP	Neighborhood
BP	GO:0055114	oxidation-reduction process	IEP	Neighborhood
MF	GO:0061134	peptidase regulator activity	IEP	Neighborhood
MF	GO:0061135	endopeptidase regulator activity	IEP	Neighborhood
MF	GO:0098772	molecular function regulator	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like	986	1125
IPR011527	ABC1_TM_dom	2	267
IPR011527	ABC1_TM_dom	646	914
IPR003439	ABC_transporter-like	345	493

External Links

No external refs found!

GSVIVT01032578001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation