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  5. GSVIVT01032601001

GSVIVT01032601001


Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.RING-domain E3 ligase activities.RING-v-type E3 ligase


Gene families : OG0000436 (Archaeplastida) Phylogenetic Tree(s): OG0000436_tree ,
OG_05_0035347 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0032245 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01032601001
Cluster HCCA: Cluster_120

Target Alias Description ECC score Gene Family Method Actions
Gb_12336 No alias RING-v-class E3 ligase 0.04 Archaeplastida
Solyc04g007600.4.1 No alias RING-v-class E3 ligase 0.04 Archaeplastida
Zm00001e026209_P003 No alias RING-v-class E3 ligase 0.03 Archaeplastida
Zm00001e031477_P002 No alias RING-v-class E3 ligase 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006520 cellular amino acid metabolic process IEP Neighborhood
BP GO:0006808 regulation of nitrogen utilization IEP Neighborhood
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP Neighborhood
MF GO:0008417 fucosyltransferase activity IEP Neighborhood
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP Neighborhood
BP GO:0042546 cell wall biogenesis IEP Neighborhood
BP GO:0044085 cellular component biogenesis IEP Neighborhood
InterPro domains Description Start Stop
IPR022143 DUF3675 107 218
IPR011016 Znf_RING-CH 56 101
No external refs found!