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  5. AMTR_s00045p00040070

AMTR_s00045p00040070 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00045.18

Description : RNA biosynthesis.transcriptional activation.MYB superfamily.MYB-related transcription factor


Gene families : OG0000067 (Archaeplastida) Phylogenetic Tree(s): OG0000067_tree ,
OG_05_0000767 (LandPlants) Phylogenetic Tree(s): OG_05_0000767_tree ,
OG_06_0000381 (SeedPlants) Phylogenetic Tree(s): OG_06_0000381_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00045p00040070
Cluster HCCA: Cluster_71

Target Alias Description ECC score Gene Family Method Actions
AT1G74840 No alias Homeodomain-like superfamily protein 0.03 Archaeplastida
AT2G38090 No alias Duplicated homeodomain-like superfamily protein 0.02 Archaeplastida
AT3G10590 No alias Duplicated homeodomain-like superfamily protein 0.03 Archaeplastida
AT5G01200 No alias Duplicated homeodomain-like superfamily protein 0.03 Archaeplastida
AT5G56840 No alias myb-like transcription factor family protein 0.03 Archaeplastida
AT5G61620 No alias myb-like transcription factor family protein 0.02 Archaeplastida
GSVIVT01016370001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
Gb_35973 No alias transcription factor (MYB-related) 0.02 Archaeplastida
LOC_Os01g09280.1 No alias transcription factor (MYB-related) 0.02 Archaeplastida
LOC_Os05g10690.1 No alias transcription factor (MYB-related) 0.02 Archaeplastida
MA_209399g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_267974g0010 No alias transcription factor (MYB-related) 0.02 Archaeplastida
MA_41803g0010 No alias transcription factor (MYB-related) 0.01 Archaeplastida
MA_4540441g0010 No alias transcription factor (MYB-related) 0.03 Archaeplastida
MA_6326342g0010 No alias transcription factor (MYB-related) 0.02 Archaeplastida
Solyc03g113620.3.1 No alias transcription factor (MYB-related) 0.05 Archaeplastida
Solyc05g052610.3.1 No alias transcription factor (MYB-related) 0.04 Archaeplastida
Solyc12g008800.3.1 No alias transcription factor (MYB-related) 0.06 Archaeplastida
Zm00001e010716_P001 No alias transcription factor (MYB-related) 0.02 Archaeplastida
Zm00001e016939_P001 No alias transcription factor (MYB-related) 0.02 Archaeplastida
Zm00001e019254_P001 No alias transcription factor (MYB-related) 0.01 Archaeplastida
Zm00001e020633_P001 No alias transcription factor (MYB-related) 0.04 Archaeplastida
Zm00001e025783_P002 No alias transcription factor (MYB-related) 0.02 Archaeplastida
Zm00001e025784_P001 No alias transcription factor (MYB-related) 0.02 Archaeplastida
Zm00001e027520_P001 No alias transcription factor (MYB-related) 0.02 Archaeplastida
Zm00001e027835_P005 No alias transcription factor (MYB-related) 0.03 Archaeplastida
Zm00001e028675_P001 No alias transcription factor (MYB-related) 0.03 Archaeplastida
Zm00001e032519_P001 No alias transcription factor (MYB-related) 0.02 Archaeplastida
Zm00001e040398_P001 No alias transcription factor (MYB-related) 0.02 Archaeplastida
Zm00001e040399_P001 No alias transcription factor (MYB-related) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0030288 outer membrane-bounded periplasmic space IEP Neighborhood
CC GO:0042597 periplasmic space IEP Neighborhood
InterPro domains Description Start Stop
IPR001005 SANT/Myb 10 56
No external refs found!