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  5. AMTR_s00045p00044950

AMTR_s00045p00044950 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00045.23

No description available


Gene families : OG0003084 (Archaeplastida) Phylogenetic Tree(s): OG0003084_tree ,
OG_05_0002086 (LandPlants) Phylogenetic Tree(s): OG_05_0002086_tree ,
OG_06_0001140 (SeedPlants) Phylogenetic Tree(s): OG_06_0001140_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00045p00044950
Cluster HCCA: Cluster_117

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00018p00121660 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AT1G63310 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.03 Archaeplastida
AT1G75260 No alias oxidoreductases, acting on NADH or NADPH 0.02 Archaeplastida
GSVIVT01027399001 No alias No description available 0.04 Archaeplastida
Gb_24431 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e008811_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e017152_P001 No alias no hits & (original description: none) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
MF GO:0016859 cis-trans isomerase activity IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!