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  5. GSVIVT01032826001

GSVIVT01032826001


Description : Disease resistance RPP8-like protein 3 OS=Arabidopsis thaliana


Gene families : OG0000088 (Archaeplastida) Phylogenetic Tree(s): OG0000088_tree ,
OG_05_0000027 (LandPlants) Phylogenetic Tree(s): OG_05_0000027_tree ,
OG_06_0000027 (SeedPlants) Phylogenetic Tree(s): OG_06_0000027_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01032826001
Cluster HCCA: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00088p00059310 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
AT1G58410 No alias Disease resistance protein (CC-NBS-LRR class) family 0.03 Archaeplastida
ChrUn.fgenesh.mRNA.26 No alias Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
GSVIVT01024102001 No alias Disease resistance RPP8-like protein 3 OS=Arabidopsis thaliana 0.02 Archaeplastida
Gb_29699 No alias Disease resistance protein RPS5 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os04g02860.1 No alias Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os08g16070.1 No alias Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os11g11960.1 No alias Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Solyc04g025840.3.1 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0004809 tRNA (guanine-N2-)-methyltransferase activity IEP Neighborhood
BP GO:0006310 DNA recombination IEP Neighborhood
BP GO:0006808 regulation of nitrogen utilization IEP Neighborhood
MF GO:0008170 N-methyltransferase activity IEP Neighborhood
MF GO:0008173 RNA methyltransferase activity IEP Neighborhood
MF GO:0008175 tRNA methyltransferase activity IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Neighborhood
BP GO:0009690 cytokinin metabolic process IEP Neighborhood
MF GO:0010181 FMN binding IEP Neighborhood
BP GO:0010817 regulation of hormone levels IEP Neighborhood
BP GO:0015074 DNA integration IEP Neighborhood
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP Neighborhood
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Neighborhood
MF GO:0019139 cytokinin dehydrogenase activity IEP Neighborhood
BP GO:0034754 cellular hormone metabolic process IEP Neighborhood
BP GO:0042445 hormone metabolic process IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!