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  5. GSVIVT01032835001

GSVIVT01032835001


Description : Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).linker subcomplex.NUP88 scaffold nucleoporin


Gene families : OG0004418 (Archaeplastida) Phylogenetic Tree(s): OG0004418_tree ,
OG_05_0004603 (LandPlants) Phylogenetic Tree(s): OG_05_0004603_tree ,
OG_06_0007952 (SeedPlants) Phylogenetic Tree(s): OG_06_0007952_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01032835001
Cluster HCCA: Cluster_196

Target Alias Description ECC score Gene Family Method Actions
AT5G05680 MOS7 nuclear pore complex protein-related 0.05 Archaeplastida
Cre06.g278900 No alias No description available 0.02 Archaeplastida
Gb_36996 No alias NUP88 scaffold nucleoporin of nuclear pore complex 0.04 Archaeplastida
LOC_Os04g51900.1 No alias NUP88 scaffold nucleoporin of nuclear pore complex 0.05 Archaeplastida
Pp3c6_24520V3.1 No alias nuclear pore complex protein-related 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006364 rRNA processing IEP Neighborhood
BP GO:0016072 rRNA metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR019321 Nucleoporin_Nup88 32 225
IPR019321 Nucleoporin_Nup88 467 765
No external refs found!