GSVIVT01032935001


Description : Cell wall.cell wall proteins.expansins.alpha-type expansin


Gene families : OG0000024 (Archaeplastida) Phylogenetic Tree(s): OG0000024_tree ,
OG_05_0035089 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0031969 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01032935001
Cluster HCCA: Cluster_107

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00230920 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.04 Archaeplastida
AMTR_s00022p00153780 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 Archaeplastida
AMTR_s00077p00063420 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 Archaeplastida
AMTR_s00110p00103570 evm_27.TU.AmTr_v1... Expansin-A4 OS=Arabidopsis thaliana 0.04 Archaeplastida
AT5G56320 ATEXP14, EXPA14,... expansin A14 0.04 Archaeplastida
GSVIVT01019965001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.04 Archaeplastida
GSVIVT01028215001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.04 Archaeplastida
Gb_01048 No alias alpha-class expansin 0.03 Archaeplastida
Gb_07424 No alias alpha-class expansin 0.04 Archaeplastida
Gb_07437 No alias alpha-class expansin 0.03 Archaeplastida
Gb_20678 No alias alpha-class expansin 0.03 Archaeplastida
LOC_Os01g14660.1 No alias alpha-class expansin 0.03 Archaeplastida
LOC_Os02g16730.1 No alias alpha-class expansin 0.03 Archaeplastida
LOC_Os02g16780.1 No alias alpha-class expansin 0.02 Archaeplastida
LOC_Os02g16839.1 No alias alpha-class expansin 0.02 Archaeplastida
LOC_Os03g21820.1 No alias alpha-class expansin 0.03 Archaeplastida
LOC_Os05g19570.1 No alias alpha-class expansin 0.02 Archaeplastida
LOC_Os06g01920.1 No alias alpha-class expansin 0.02 Archaeplastida
LOC_Os06g41700.1 No alias alpha-class expansin 0.03 Archaeplastida
LOC_Os10g30330.1 No alias alpha-class expansin 0.04 Archaeplastida
LOC_Os10g30340.1 No alias alpha-class expansin 0.04 Archaeplastida
LOC_Os10g39110.1 No alias alpha-class expansin 0.03 Archaeplastida
MA_10020g0010 No alias alpha-class expansin 0.03 Archaeplastida
MA_104065g0020 No alias alpha-class expansin 0.02 Archaeplastida
MA_10425823g0010 No alias alpha-class expansin 0.03 Archaeplastida
MA_30127g0010 No alias alpha-class expansin 0.02 Archaeplastida
MA_3618g0010 No alias Expansin-A15 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_36587g0010 No alias alpha-class expansin 0.03 Archaeplastida
MA_37884g0010 No alias alpha-class expansin 0.05 Archaeplastida
MA_45587g0020 No alias alpha-class expansin 0.02 Archaeplastida
MA_474624g0010 No alias alpha-class expansin 0.04 Archaeplastida
MA_4979g0010 No alias alpha-class expansin 0.05 Archaeplastida
MA_70880g0010 No alias alpha-class expansin 0.02 Archaeplastida
MA_7218g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_86877g0010 No alias alpha-class expansin 0.03 Archaeplastida
MA_8784268g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_915221g0010 No alias alpha-class expansin 0.03 Archaeplastida
MA_91602g0010 No alias Expansin-A2 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Mp1g22700.1 No alias alpha-class expansin 0.02 Archaeplastida
Pp3c12_4560V3.1 No alias expansin A9 0.02 Archaeplastida
Pp3c13_20360V3.1 No alias expansin A9 0.04 Archaeplastida
Pp3c14_18450V3.1 No alias expansin A14 0.03 Archaeplastida
Pp3c21_1850V3.1 No alias expansin A1 0.03 Archaeplastida
Pp3c24_15400V3.1 No alias expansin A15 0.02 Archaeplastida
Pp3c8_13450V3.1 No alias expansin A1 0.02 Archaeplastida
Pp3c8_13470V3.1 No alias expansin A1 0.02 Archaeplastida
Smo143857 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 Archaeplastida
Smo230202 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 Archaeplastida
Solyc03g115300.2.1 No alias alpha-class expansin 0.06 Archaeplastida
Solyc03g115310.1.1 No alias alpha-class expansin 0.03 Archaeplastida
Solyc03g115890.3.1 No alias alpha-class expansin 0.02 Archaeplastida
Solyc06g005560.4.1 No alias alpha-class expansin 0.03 Archaeplastida
Zm00001e004720_P001 No alias alpha-class expansin 0.02 Archaeplastida
Zm00001e017221_P001 No alias alpha-class expansin 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Neighborhood
MF GO:0004721 phosphoprotein phosphatase activity IEP Neighborhood
BP GO:0005985 sucrose metabolic process IEP Neighborhood
BP GO:0006721 terpenoid metabolic process IEP Neighborhood
BP GO:0006808 regulation of nitrogen utilization IEP Neighborhood
BP GO:0007010 cytoskeleton organization IEP Neighborhood
BP GO:0007165 signal transduction IEP Neighborhood
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Neighborhood
MF GO:0008194 UDP-glycosyltransferase activity IEP Neighborhood
MF GO:0008483 transaminase activity IEP Neighborhood
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEP Neighborhood
BP GO:0016114 terpenoid biosynthetic process IEP Neighborhood
MF GO:0016157 sucrose synthase activity IEP Neighborhood
BP GO:0016311 dephosphorylation IEP Neighborhood
MF GO:0016744 transferase activity, transferring aldehyde or ketonic groups IEP Neighborhood
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Neighborhood
BP GO:0019915 lipid storage IEP Neighborhood
BP GO:0035556 intracellular signal transduction IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051235 maintenance of location IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
InterPro domains Description Start Stop
IPR007117 Expansin_CBD 261 338
IPR009009 RlpA-like_DPBB 165 250
No external refs found!