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  5. GSVIVT01033003001

GSVIVT01033003001


Description : RNA processing.organelle machineries.RNA editing.mitochondrial RNA editing.MEF14 RNA editing factor


Gene families : OG0005026 (Archaeplastida) Phylogenetic Tree(s): OG0005026_tree ,
OG_05_0005504 (LandPlants) Phylogenetic Tree(s): OG_05_0005504_tree ,
OG_06_0005278 (SeedPlants) Phylogenetic Tree(s): OG_06_0005278_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01033003001
Cluster HCCA: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
AT3G26780 No alias Phosphoglycerate mutase family protein 0.04 Archaeplastida
Gb_05421 No alias RNA editing factor (MEF14) 0.06 Archaeplastida
Zm00001e021512_P002 No alias RNA editing factor (MEF14) 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004420 hydroxymethylglutaryl-CoA reductase (NADPH) activity IEP Neighborhood
BP GO:0015936 coenzyme A metabolic process IEP Neighborhood
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Neighborhood
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Neighborhood
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Neighborhood
MF GO:0050662 coenzyme binding IEP Neighborhood
BP GO:1901135 carbohydrate derivative metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR013078 His_Pase_superF_clade-1 212 266
IPR013078 His_Pase_superF_clade-1 6 143
No external refs found!