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  5. AMTR_s00045p00064060

AMTR_s00045p00064060 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00045.48

Description : Cell wall.pectin.rhamnogalacturonan I.modification and degradation.alpha-L-arabinofuranosidase activities.bifunctional BXL-type alpha-L-arabinofuranosidase and beta-D-xylosidase


Gene families : OG0000435 (Archaeplastida) Phylogenetic Tree(s): OG0000435_tree ,
OG_05_0000257 (LandPlants) Phylogenetic Tree(s): OG_05_0000257_tree ,
OG_06_0004246 (SeedPlants) Phylogenetic Tree(s): OG_06_0004246_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00045p00064060
Cluster HCCA: Cluster_268

Target Alias Description ECC score Gene Family Method Actions
AT1G02640 ATBXL2, BXL2 beta-xylosidase 2 0.05 Archaeplastida
GSVIVT01017658001 No alias Cell wall.pectin.rhamnogalacturonan I.modification and... 0.04 Archaeplastida
GSVIVT01017659001 No alias Cell wall.pectin.rhamnogalacturonan I.modification and... 0.04 Archaeplastida
LOC_Os02g51620.1 No alias bifunctional alpha-L-arabinofuranosidase and... 0.02 Archaeplastida
LOC_Os04g54810.1 No alias bifunctional alpha-L-arabinofuranosidase and... 0.02 Archaeplastida
LOC_Os11g18730.1 No alias bifunctional alpha-L-arabinofuranosidase and... 0.02 Archaeplastida
MA_140124g0010 No alias bifunctional alpha-L-arabinofuranosidase and... 0.02 Archaeplastida
MA_791061g0010 No alias bifunctional alpha-L-arabinofuranosidase and... 0.03 Archaeplastida
Zm00001e037605_P001 No alias bifunctional alpha-L-arabinofuranosidase and... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004474 malate synthase activity IEP Neighborhood
MF GO:0004476 mannose-6-phosphate isomerase activity IEP Neighborhood
MF GO:0004866 endopeptidase inhibitor activity IEP Neighborhood
BP GO:0006081 cellular aldehyde metabolic process IEP Neighborhood
BP GO:0006097 glyoxylate cycle IEP Neighborhood
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
MF GO:0010181 FMN binding IEP Neighborhood
MF GO:0016860 intramolecular oxidoreductase activity IEP Neighborhood
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Neighborhood
MF GO:0030414 peptidase inhibitor activity IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
BP GO:0046487 glyoxylate metabolic process IEP Neighborhood
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Neighborhood
MF GO:0061134 peptidase regulator activity IEP Neighborhood
MF GO:0061135 endopeptidase regulator activity IEP Neighborhood
InterPro domains Description Start Stop
IPR001764 Glyco_hydro_3_N 69 366
IPR002772 Glyco_hydro_3_C 407 638
IPR026891 Fn3-like 707 775
No external refs found!