GSVIVT01033035001


Description : Double-stranded RNA-binding protein 5 OS=Arabidopsis thaliana


Gene families : OG0000434 (Archaeplastida) Phylogenetic Tree(s): OG0000434_tree ,
OG_05_0000373 (LandPlants) Phylogenetic Tree(s): OG_05_0000373_tree ,
OG_06_0000829 (SeedPlants) Phylogenetic Tree(s): OG_06_0000829_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01033035001
Cluster HCCA: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00199170 evm_27.TU.AmTr_v1... Double-stranded RNA-binding protein 2 OS=Oryza sativa... 0.06 Archaeplastida
AT2G28380 DRB2 dsRNA-binding protein 2 0.04 Archaeplastida
AT3G26932 DRB3 dsRNA-binding protein 3 0.04 Archaeplastida
LOC_Os09g33460.1 No alias Double-stranded RNA-binding protein 5 OS=Oryza sativa... 0.08 Archaeplastida
MA_10437208g0010 No alias Double-stranded RNA-binding protein 5 OS=Oryza sativa... 0.07 Archaeplastida
MA_15142g0010 No alias Double-stranded RNA-binding protein 2 OS=Arabidopsis... 0.03 Archaeplastida
MA_252004g0010 No alias No annotation 0.02 Archaeplastida
MA_693782g0010 No alias component HYL1 of DCL1-HYL1 miRNA biogenesis complex 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP Neighborhood
MF GO:0003887 DNA-directed DNA polymerase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
MF GO:0034061 DNA polymerase activity IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0140097 catalytic activity, acting on DNA IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR014720 dsRBD_dom 88 152
IPR014720 dsRBD_dom 3 68
No external refs found!