GSVIVT01033137001

Description : Solute transport.channels.GLR ligand-gated cation channel

Gene families : OG0000085 (Archaeplastida) Phylogenetic Tree(s): OG0000085_tree ,
OG_05_0000261 (LandPlants) Phylogenetic Tree(s): OG_05_0000261_tree ,
OG_06_0000114 (SeedPlants) Phylogenetic Tree(s): OG_06_0000114_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01033137001
Cluster	HCCA: Cluster_169

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00010p00140120	evm_27.TU.AmTr_v1...	Solute transport.channels.GLR ligand-gated cation channel	0.05	Archaeplastida
AMTR_s00019p00180640	evm_27.TU.AmTr_v1...	Solute transport.channels.GLR ligand-gated cation channel	0.02	Archaeplastida
AMTR_s00019p00180760	evm_27.TU.AmTr_v1...	Solute transport.channels.GLR ligand-gated cation channel	0.03	Archaeplastida
AMTR_s00019p00181760	evm_27.TU.AmTr_v1...	Solute transport.channels.GLR ligand-gated cation channel	0.05	Archaeplastida
AMTR_s00019p00181830	evm_27.TU.AmTr_v1...	Solute transport.channels.GLR ligand-gated cation channel	0.05	Archaeplastida
AMTR_s00019p00182190	evm_27.TU.AmTr_v1...	Solute transport.channels.GLR ligand-gated cation channel	0.05	Archaeplastida
AMTR_s00019p00182440	evm_27.TU.AmTr_v1...	Solute transport.channels.GLR ligand-gated cation channel	0.02	Archaeplastida
AMTR_s00019p00182630	evm_27.TU.AmTr_v1...	Solute transport.channels.GLR ligand-gated cation channel	0.04	Archaeplastida
AMTR_s00019p00186040	evm_27.TU.AmTr_v1...	Solute transport.channels.GLR ligand-gated cation channel	0.04	Archaeplastida
AMTR_s00062p00055860	evm_27.TU.AmTr_v1...	Solute transport.channels.GLR ligand-gated cation channel	0.03	Archaeplastida
AT2G24720	GLR2.2, ATGLR2.2	glutamate receptor 2.2	0.06	Archaeplastida
AT2G29100	ATGLR2.9, GLR2.9	glutamate receptor 2.9	0.05	Archaeplastida
AT2G29120	GLR2.7, ATGLR2.7	glutamate receptor 2.7	0.08	Archaeplastida
AT2G32390	ATGLR3.5, GLR6, GLR3.5	glutamate receptor 3.5	0.04	Archaeplastida
AT3G04110	ATGLR1.1, GLR1.1, GLR1	glutamate receptor 1.1	0.05	Archaeplastida
AT3G07520	GLR1.4, ATGLR1.4	glutamate receptor 1.4	0.03	Archaeplastida
AT5G11180	ATGLR2.6, GLR2.6	glutamate receptor 2.6	0.03	Archaeplastida
AT5G11210	GLR2.5, ATGLR2.5	glutamate receptor 2.5	0.03	Archaeplastida
AT5G27100	GLR2.1, ATGLR2.1	glutamate receptor 2.1	0.08	Archaeplastida
AT5G48400	ATGLR1.2, GLR1.2	Glutamate receptor family protein	0.04	Archaeplastida
AT5G48410	ATGLR1.3, GLR1.3	glutamate receptor 1.3	0.03	Archaeplastida
GSVIVT01021161001	No alias	Solute transport.channels.GLR ligand-gated cation channel	0.04	Archaeplastida
GSVIVT01029195001	No alias	Solute transport.channels.GLR ligand-gated cation channel	0.04	Archaeplastida
GSVIVT01029198001	No alias	Solute transport.channels.GLR ligand-gated cation channel	0.05	Archaeplastida
GSVIVT01033121001	No alias	Solute transport.channels.GLR ligand-gated cation channel	0.03	Archaeplastida
GSVIVT01033129001	No alias	Solute transport.channels.GLR ligand-gated cation channel	0.03	Archaeplastida
GSVIVT01033139001	No alias	Solute transport.channels.GLR ligand-gated cation channel	0.03	Archaeplastida
GSVIVT01033142001	No alias	Solute transport.channels.GLR ligand-gated cation channel	0.05	Archaeplastida
GSVIVT01033150001	No alias	Solute transport.channels.GLR ligand-gated cation channel	0.03	Archaeplastida
GSVIVT01033155001	No alias	Solute transport.channels.GLR ligand-gated cation channel	0.03	Archaeplastida
GSVIVT01033160001	No alias	Solute transport.channels.GLR ligand-gated cation channel	0.03	Archaeplastida
Gb_09070	No alias	ligand-gated cation channel (GLR)	0.03	Archaeplastida
Gb_16131	No alias	ligand-gated cation channel (GLR)	0.03	Archaeplastida
Gb_26917	No alias	ligand-gated cation channel (GLR)	0.03	Archaeplastida
Gb_28362	No alias	ligand-gated cation channel (GLR)	0.02	Archaeplastida
LOC_Os02g54640.1	No alias	ligand-gated cation channel (GLR)	0.03	Archaeplastida
LOC_Os09g26144.1	No alias	ligand-gated cation channel (GLR)	0.03	Archaeplastida
Pp3c15_25650V3.1	No alias	glutamate receptor 3.3	0.02	Archaeplastida
Solyc04g078860.4.1	No alias	ligand-gated cation channel (GLR)	0.1	Archaeplastida
Solyc04g082610.3.1	No alias	ligand-gated cation channel (GLR)	0.03	Archaeplastida
Solyc06g063170.3.1	No alias	ligand-gated cation channel (GLR)	0.07	Archaeplastida
Solyc06g063180.3.1	No alias	ligand-gated cation channel (GLR)	0.04	Archaeplastida
Solyc06g063190.3.1	No alias	ligand-gated cation channel (GLR)	0.04	Archaeplastida
Solyc06g063200.2.1	No alias	ligand-gated cation channel (GLR)	0.04	Archaeplastida
Solyc06g063210.3.1	No alias	ligand-gated cation channel (GLR)	0.03	Archaeplastida
Solyc08g006500.4.1	No alias	ligand-gated cation channel (GLR)	0.09	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0004888	transmembrane signaling receptor activity	None	Extended
MF	GO:0004970	ionotropic glutamate receptor activity	IEA	Interproscan
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005216	ion channel activity	None	Extended
MF	GO:0005230	extracellular ligand-gated ion channel activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
MF	GO:0008066	glutamate receptor activity	None	Extended
MF	GO:0015075	ion transmembrane transporter activity	None	Extended
MF	GO:0015267	channel activity	None	Extended
MF	GO:0015276	ligand-gated ion channel activity	None	Extended
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0022803	passive transmembrane transporter activity	None	Extended
MF	GO:0022824	transmitter-gated ion channel activity	None	Extended
MF	GO:0022834	ligand-gated channel activity	None	Extended
MF	GO:0022835	transmitter-gated channel activity	None	Extended
MF	GO:0022836	gated channel activity	None	Extended
MF	GO:0022838	substrate-specific channel activity	None	Extended
MF	GO:0022839	ion gated channel activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030594	neurotransmitter receptor activity	None	Extended
MF	GO:0038023	signaling receptor activity	None	Extended
MF	GO:0060089	molecular transducer activity	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0004175	endopeptidase activity	IEP	Neighborhood
MF	GO:0004252	serine-type endopeptidase activity	IEP	Neighborhood
MF	GO:0005488	binding	IEP	Neighborhood
MF	GO:0005506	iron ion binding	IEP	Neighborhood
MF	GO:0005509	calcium ion binding	IEP	Neighborhood
MF	GO:0005515	protein binding	IEP	Neighborhood
MF	GO:0005544	calcium-dependent phospholipid binding	IEP	Neighborhood
MF	GO:0008236	serine-type peptidase activity	IEP	Neighborhood
BP	GO:0010215	cellulose microfibril organization	IEP	Neighborhood
BP	GO:0016049	cell growth	IEP	Neighborhood
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	Neighborhood
MF	GO:0017171	serine hydrolase activity	IEP	Neighborhood
MF	GO:0020037	heme binding	IEP	Neighborhood
BP	GO:0030198	extracellular matrix organization	IEP	Neighborhood
MF	GO:0030554	adenyl nucleotide binding	IEP	Neighborhood
CC	GO:0031225	anchored component of membrane	IEP	Neighborhood
MF	GO:0032559	adenyl ribonucleotide binding	IEP	Neighborhood
BP	GO:0040007	growth	IEP	Neighborhood
BP	GO:0043062	extracellular structure organization	IEP	Neighborhood
MF	GO:0043167	ion binding	IEP	Neighborhood
MF	GO:0043168	anion binding	IEP	Neighborhood
MF	GO:0043169	cation binding	IEP	Neighborhood
MF	GO:0043531	ADP binding	IEP	Neighborhood
MF	GO:0046872	metal ion binding	IEP	Neighborhood
MF	GO:0046906	tetrapyrrole binding	IEP	Neighborhood
MF	GO:0048037	cofactor binding	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001638	Solute-binding_3/MltF_N	350	672
IPR001320	Iontro_rcpt	673	703
IPR001320	Iontro_rcpt	1584	1614
IPR001638	Solute-binding_3/MltF_N	1267	1583
IPR001828	ANF_lig-bd_rcpt	2	275
IPR001828	ANF_lig-bd_rcpt	864	1192

External Links

No external refs found!

GSVIVT01033137001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation