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  5. AMTR_s00045p00069510

AMTR_s00045p00069510 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00045.57

Description : Chlorophyll a-b binding protein, chloroplastic (Fragment) OS=Glycine max


Gene families : OG0000035 (Archaeplastida) Phylogenetic Tree(s): OG0000035_tree ,
OG_05_0043172 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0037685 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00045p00069510
Cluster HCCA: Cluster_76

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00169p00059210 evm_27.TU.AmTr_v1... Chlorophyll a-b binding protein 40, chloroplastic... 0.04 Archaeplastida
Mp7g05980.1 No alias component LHCb1/2/3 of LHC-II complex 0.02 Archaeplastida
Mp7g06740.1 No alias component LHCb1/2/3 of LHC-II complex 0.02 Archaeplastida
Solyc02g070980.1.1 No alias component LHCb1/2/3 of LHC-II complex 0.02 Archaeplastida
Solyc02g070990.1.1 No alias component LHCb1/2/3 of LHC-II complex 0.02 Archaeplastida
Solyc02g071000.1.1 No alias component LHCb1/2/3 of LHC-II complex 0.02 Archaeplastida
Solyc02g071030.2.1 No alias component LHCb1/2/3 of LHC-II complex 0.02 Archaeplastida
Solyc08g067330.1.1 No alias Chlorophyll a-b binding protein 16, chloroplastic... 0.02 Archaeplastida
Solyc12g011280.2.1 No alias component LHCa3 of LHC-I complex 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006352 DNA-templated transcription, initiation IEP Neighborhood
MF GO:0016987 sigma factor activity IEP Neighborhood
InterPro domains Description Start Stop
IPR022796 Chloroa_b-bind 111 155
No external refs found!