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  5. GSVIVT01033172001

GSVIVT01033172001


Description : RNA processing.RNA splicing.spliceosome-associated non-snRNP factors.RSZ21/22 splicing factor


Gene families : OG0002592 (Archaeplastida) Phylogenetic Tree(s): OG0002592_tree ,
OG_05_0002271 (LandPlants) Phylogenetic Tree(s): OG_05_0002271_tree ,
OG_06_0002305 (SeedPlants) Phylogenetic Tree(s): OG_06_0002305_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01033172001
Cluster HCCA: Cluster_149

Target Alias Description ECC score Gene Family Method Actions
AT2G24590 At-RSZ22a, RSZ22a RNA recognition motif and CCHC-type zinc finger domains... 0.04 Archaeplastida
AT4G31580 RSZ22, At-RSZ22,... serine/arginine-rich 22 0.03 Archaeplastida
Cre09.g408200 No alias RNA processing.RNA splicing.spliceosome-associated... 0.07 Archaeplastida
Gb_16463 No alias RSZ21/22 RNA splicing factor 0.03 Archaeplastida
Pp3c7_5100V3.1 No alias serine/arginine-rich 22 0.03 Archaeplastida
Zm00001e015077_P001 No alias RSZ21/22 RNA splicing factor 0.07 Archaeplastida
Zm00001e016090_P001 No alias RSZ21/22 RNA splicing factor 0.06 Archaeplastida
Zm00001e022939_P001 No alias RSZ21/22 RNA splicing factor 0.08 Archaeplastida
Zm00001e023726_P001 No alias RSZ21/22 RNA splicing factor 0.03 Archaeplastida
Zm00001e036288_P001 No alias RSZ21/22 RNA splicing factor 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Neighborhood
CC GO:0000313 organellar ribosome IEP Neighborhood
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP Neighborhood
CC GO:0005761 mitochondrial ribosome IEP Neighborhood
BP GO:0006457 protein folding IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
BP GO:0035556 intracellular signal transduction IEP Neighborhood
MF GO:0042802 identical protein binding IEP Neighborhood
MF GO:0042803 protein homodimerization activity IEP Neighborhood
CC GO:0044429 mitochondrial part IEP Neighborhood
MF GO:0051087 chaperone binding IEP Neighborhood
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Neighborhood
MF GO:0060590 ATPase regulator activity IEP Neighborhood
CC GO:0098798 mitochondrial protein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR001878 Znf_CCHC 93 108
IPR000504 RRM_dom 4 61
No external refs found!