GSVIVT01033307001

Description : Putative elongation factor TypA-like SVR3, chloroplastic OS=Arabidopsis thaliana

Gene families : OG0001947 (Archaeplastida) Phylogenetic Tree(s): OG0001947_tree ,
OG_05_0007265 (LandPlants) Phylogenetic Tree(s): OG_05_0007265_tree ,
OG_06_0009704 (SeedPlants) Phylogenetic Tree(s): OG_06_0009704_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01033307001
Cluster	HCCA: Cluster_124

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00103p00148260	evm_27.TU.AmTr_v1...	Putative elongation factor TypA-like SVR3, chloroplastic...	0.04	Archaeplastida
Gb_15061	No alias	Putative elongation factor TypA-like SVR3, chloroplastic...	0.06	Archaeplastida
LOC_Os02g18450.1	No alias	Putative elongation factor TypA-like SVR3, chloroplastic...	0.03	Archaeplastida
MA_138810g0010	No alias	Putative elongation factor TypA-like SVR3, chloroplastic...	0.07	Archaeplastida
Pp3c16_24460V3.1	No alias	elongation factor family protein	0.02	Archaeplastida
Pp3c25_15260V3.1	No alias	elongation factor family protein	0.03	Archaeplastida
Smo145812	No alias	Putative elongation factor TypA-like SVR3, chloroplastic...	0.03	Archaeplastida
Zm00001e014138_P001	No alias	Putative elongation factor TypA-like SVR3, chloroplastic...	0.06	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0001882	nucleoside binding	None	Extended
MF	GO:0001883	purine nucleoside binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032549	ribonucleoside binding	None	Extended
MF	GO:0032550	purine ribonucleoside binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0006790	sulfur compound metabolic process	IEP	Neighborhood
CC	GO:0016021	integral component of membrane	IEP	Neighborhood
BP	GO:0016226	iron-sulfur cluster assembly	IEP	Neighborhood
BP	GO:0022607	cellular component assembly	IEP	Neighborhood
BP	GO:0031163	metallo-sulfur cluster assembly	IEP	Neighborhood
CC	GO:0031224	intrinsic component of membrane	IEP	Neighborhood
CC	GO:0044425	membrane part	IEP	Neighborhood
BP	GO:0051186	cofactor metabolic process	IEP	Neighborhood
BP	GO:0055085	transmembrane transport	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR000795	TF_GTP-bd_dom	82	273
IPR000640	EFG_V-like	474	559
IPR004161	EFTu-like_2	297	366

External Links

No external refs found!