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  5. GSVIVT01033331001

GSVIVT01033331001


Description : Chromatin organisation.chromatin remodeling complexes.SWR1 complex.SWC6 component


Gene families : OG0002345 (Archaeplastida) Phylogenetic Tree(s): OG0002345_tree ,
OG_05_0009446 (LandPlants) Phylogenetic Tree(s): OG_05_0009446_tree ,
OG_06_0010762 (SeedPlants) Phylogenetic Tree(s): OG_06_0010762_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01033331001
Cluster HCCA: Cluster_63

Target Alias Description ECC score Gene Family Method Actions
AT5G16850 TERT, ATTERT telomerase reverse transcriptase 0.01 Archaeplastida
LOC_Os03g25260.1 No alias component SWC6 of SWR1 chromatin remodeling complex 0.01 Archaeplastida
Mp4g00310.1 No alias component SWC6 of SWR1 chromatin remodeling complex 0.02 Archaeplastida
Solyc03g033480.4.1 No alias component SWC6 of SWR1 chromatin remodeling complex 0.1 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP Neighborhood
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005622 intracellular IEP Neighborhood
CC GO:0005840 ribosome IEP Neighborhood
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Neighborhood
BP GO:0006412 translation IEP Neighborhood
BP GO:0006518 peptide metabolic process IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0008610 lipid biosynthetic process IEP Neighborhood
BP GO:0009058 biosynthetic process IEP Neighborhood
CC GO:0016592 mediator complex IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0043043 peptide biosynthetic process IEP Neighborhood
CC GO:0043228 non-membrane-bounded organelle IEP Neighborhood
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Neighborhood
BP GO:0043603 cellular amide metabolic process IEP Neighborhood
BP GO:0043604 amide biosynthetic process IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1901576 organic substance biosynthetic process IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR007529 Znf_HIT 131 159
No external refs found!