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  5. GSVIVT01033348001

GSVIVT01033348001


Description : Cellular respiration.oxidative phosphorylation.NADH dehydrogenase complex.non-core components.beta subcomplex.NDUFB11 component


Gene families : OG0000000 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000000 (LandPlants) Phylogenetic Tree(s): OG_05_0000000_tree ,
OG_06_0000024 (SeedPlants) Phylogenetic Tree(s): OG_06_0000024_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01033348001
Cluster HCCA: Cluster_42

Target Alias Description ECC score Gene Family Method Actions
MA_159535g0010 No alias Pentatricopeptide repeat-containing protein At3g12770... 0.01 Archaeplastida
Smo137632 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.01 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005741 mitochondrial outer membrane IEP Neighborhood
CC GO:0005840 ribosome IEP Neighborhood
CC GO:0017053 transcriptional repressor complex IEP Neighborhood
MF GO:0019208 phosphatase regulator activity IEP Neighborhood
MF GO:0019211 phosphatase activator activity IEP Neighborhood
CC GO:0019867 outer membrane IEP Neighborhood
CC GO:0031968 organelle outer membrane IEP Neighborhood
CC GO:0043228 non-membrane-bounded organelle IEP Neighborhood
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0098805 whole membrane IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR032867 DYW_dom 452 575
IPR002885 Pentatricopeptide_repeat 74 121
IPR002885 Pentatricopeptide_repeat 176 222
IPR002885 Pentatricopeptide_repeat 277 325
IPR002885 Pentatricopeptide_repeat 353 377
IPR002885 Pentatricopeptide_repeat 251 276
No external refs found!