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  5. GSVIVT01033394001

GSVIVT01033394001


Description : Cytoskeleton.actin and tubulin folding.CCT chaperonin folding complex.CCT8 theta subunit


Gene families : OG0006424 (Archaeplastida) Phylogenetic Tree(s): OG0006424_tree ,
OG_05_0007960 (LandPlants) Phylogenetic Tree(s): OG_05_0007960_tree ,
OG_06_0009313 (SeedPlants) Phylogenetic Tree(s): OG_06_0009313_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01033394001
Cluster HCCA: Cluster_60

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00079950 evm_27.TU.AmTr_v1... Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.06 Archaeplastida
AT3G03960 No alias TCP-1/cpn60 chaperonin family protein 0.15 Archaeplastida
Cpa|evm.model.tig00000157.20 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.04 Archaeplastida
Cre03.g168450 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.08 Archaeplastida
LOC_Os03g59020.1 No alias CCT8 subunit theta of CCT chaperonin folding complex 0.08 Archaeplastida
MA_100776g0010 No alias CCT8 subunit theta of CCT chaperonin folding complex 0.09 Archaeplastida
Pp3c15_13410V3.1 No alias TCP-1/cpn60 chaperonin family protein 0.05 Archaeplastida
Smo143104 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.05 Archaeplastida
Solyc01g088080.3.1 No alias CCT8 subunit theta of CCT chaperonin folding complex 0.1 Archaeplastida
Zm00001e011242_P002 No alias CCT8 subunit theta of CCT chaperonin folding complex 0.1 Archaeplastida
Zm00001e024443_P002 No alias CCT8 subunit theta of CCT chaperonin folding complex 0.12 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Neighborhood
BP GO:0000226 microtubule cytoskeleton organization IEP Neighborhood
CC GO:0000776 kinetochore IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003697 single-stranded DNA binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
CC GO:0005875 microtubule associated complex IEP Neighborhood
BP GO:0007010 cytoskeleton organization IEP Neighborhood
BP GO:0007051 spindle organization IEP Neighborhood
MF GO:0008097 5S rRNA binding IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
BP GO:0022402 cell cycle process IEP Neighborhood
CC GO:0031262 Ndc80 complex IEP Neighborhood
MF GO:0043015 gamma-tubulin binding IEP Neighborhood
CC GO:0043228 non-membrane-bounded organelle IEP Neighborhood
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Neighborhood
BP GO:0051225 spindle assembly IEP Neighborhood
CC GO:0070652 HAUS complex IEP Neighborhood
BP GO:0070925 organelle assembly IEP Neighborhood
InterPro domains Description Start Stop
IPR002423 Cpn60/TCP-1 38 530
No external refs found!