Description : Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL6 component
Gene families : OG0002580 (Archaeplastida) Phylogenetic Tree(s): OG0002580_tree ,
OG_05_0002755 (LandPlants) Phylogenetic Tree(s): OG_05_0002755_tree ,
OG_06_0003200 (SeedPlants) Phylogenetic Tree(s): OG_06_0003200_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: GSVIVT01033532001 | |
Cluster | HCCA: Cluster_22 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00022p00218700 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.24 | Archaeplastida | |
AT1G18540 | No alias | Ribosomal protein L6 family protein | 0.38 | Archaeplastida | |
AT1G74050 | No alias | Ribosomal protein L6 family protein | 0.22 | Archaeplastida | |
AT1G74060 | No alias | Ribosomal protein L6 family protein | 0.16 | Archaeplastida | |
Cpa|evm.model.tig00021127.127 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.24 | Archaeplastida | |
Cre01.g011000 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.26 | Archaeplastida | |
Gb_01604 | No alias | component RPL6 of LSU proteome component | 0.23 | Archaeplastida | |
LOC_Os02g37862.1 | No alias | component RPL6 of LSU proteome component | 0.31 | Archaeplastida | |
LOC_Os04g39700.1 | No alias | component RPL6 of LSU proteome component | 0.36 | Archaeplastida | |
MA_108607g0010 | No alias | component RPL6 of LSU proteome component | 0.29 | Archaeplastida | |
Mp3g11670.1 | No alias | component RPL6 of LSU proteome component | 0.37 | Archaeplastida | |
Pp3c14_4100V3.1 | No alias | Ribosomal protein L6 family protein | 0.14 | Archaeplastida | |
Pp3c14_4160V3.1 | No alias | Ribosomal protein L6 family protein | 0.26 | Archaeplastida | |
Pp3c1_24300V3.1 | No alias | Ribosomal protein L6 family protein | 0.17 | Archaeplastida | |
Pp3c2_13300V3.1 | No alias | Ribosomal protein L6 family protein | 0.14 | Archaeplastida | |
Smo270686 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.21 | Archaeplastida | |
Solyc04g014720.4.1 | No alias | component RPL6 of LSU proteome component | 0.13 | Archaeplastida | |
Solyc05g054070.4.1 | No alias | component RPL6 of LSU proteome component | 0.16 | Archaeplastida | |
Solyc11g012110.2.1 | No alias | component RPL6 of LSU proteome component | 0.32 | Archaeplastida | |
Zm00001e014979_P001 | No alias | component RPL6 of LSU proteome component | 0.23 | Archaeplastida | |
Zm00001e022840_P001 | No alias | component RPL6 of LSU proteome component | 0.32 | Archaeplastida | |
Zm00001e022841_P001 | No alias | component RPL6 of LSU proteome component | 0.3 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
CC | GO:0005622 | intracellular | IEA | Interproscan |
CC | GO:0005840 | ribosome | IEA | Interproscan |
BP | GO:0006412 | translation | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000105 | histidine biosynthetic process | IEP | Neighborhood |
MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
MF | GO:0003723 | RNA binding | IEP | Neighborhood |
MF | GO:0003746 | translation elongation factor activity | IEP | Neighborhood |
BP | GO:0006414 | translational elongation | IEP | Neighborhood |
BP | GO:0006547 | histidine metabolic process | IEP | Neighborhood |
BP | GO:0009073 | aromatic amino acid family biosynthetic process | IEP | Neighborhood |
MF | GO:0019843 | rRNA binding | IEP | Neighborhood |
BP | GO:0052803 | imidazole-containing compound metabolic process | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000915 | 60S_ribosomal_L6E | 99 | 205 |
No external refs found! |