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  5. GSVIVT01033648001

GSVIVT01033648001


Description : RNA biosynthesis.transcriptional activation.MYB superfamily.MYB transcription factor


Gene families : OG0000002 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000002 (LandPlants) Phylogenetic Tree(s): OG_05_0000002_tree ,
OG_06_0000210 (SeedPlants) Phylogenetic Tree(s): OG_06_0000210_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01033648001
Cluster HCCA: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00219710 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
AMTR_s00012p00208260 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00133p00071910 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
AT1G18570 AtMYB51, BW51B,... myb domain protein 51 0.04 Archaeplastida
AT3G18100 MYB4R1, AtMYB4R1 myb domain protein 4r1 0.02 Archaeplastida
AT3G23250 ATMYB15, ATY19, MYB15 myb domain protein 15 0.02 Archaeplastida
AT3G49690 MYB84, RAX3, ATMYB84 myb domain protein 84 0.03 Archaeplastida
AT4G05100 AtMYB74, MYB74 myb domain protein 74 0.04 Archaeplastida
AT4G21440 ATMYB102, ATM4, MYB102 MYB-like 102 0.02 Archaeplastida
AT5G67300 MYBR1, MYB44,... myb domain protein r1 0.04 Archaeplastida
GSVIVT01000450001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
Gb_01889 No alias transcription factor (MYB) 0.02 Archaeplastida
Gb_11232 No alias transcription factor (MYB) 0.02 Archaeplastida
Gb_15607 No alias transcription factor (MYB) 0.05 Archaeplastida
Gb_22885 No alias transcription factor (MYB) 0.03 Archaeplastida
Gb_34388 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os01g19330.1 No alias transcription factor (MYB) 0.05 Archaeplastida
LOC_Os01g49160.1 No alias transcription factor (MYB) 0.05 Archaeplastida
LOC_Os01g52410.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os02g40530.1 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os02g41510.1 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os03g20090.1 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os03g27090.1 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os03g51110.1 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os04g43680.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os05g04210.1 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os05g35500.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os05g48010.1 No alias transcription factor (MYB) 0.05 Archaeplastida
LOC_Os09g23620.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os10g35660.1 No alias transcription factor (MYB) 0.05 Archaeplastida
LOC_Os11g45740.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os12g07640.1 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_10217366g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_10427849g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_10430220g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_10434028g0010 No alias transcription factor (MYB) 0.04 Archaeplastida
MA_1201g0010 No alias transcription factor (MYB) 0.05 Archaeplastida
MA_121533g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_137934g0010 No alias transcription factor (MYB) 0.05 Archaeplastida
MA_15502g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_257850g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_45091g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_53644g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_8206949g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_9818613g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
Mp5g14610.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Pp3c17_7730V3.1 No alias myb domain protein 55 0.02 Archaeplastida
Pp3c1_42920V3.1 No alias myb domain protein 103 0.03 Archaeplastida
Pp3c4_13790V3.1 No alias myb domain protein 105 0.03 Archaeplastida
Pp3c7_23490V3.1 No alias myb domain protein 106 0.03 Archaeplastida
Pp3c9_10290V3.1 No alias myb domain protein 55 0.03 Archaeplastida
Pp3c9_24170V3.1 No alias myb domain protein 33 0.04 Archaeplastida
Solyc03g005570.3.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc03g093890.3.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc03g093940.2.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc03g119370.2.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc05g007160.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc05g053150.2.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc07g053230.3.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc08g008480.4.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc12g099130.2.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e007085_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e009849_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e012960_P002 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e018186_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e023733_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e025867_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e039756_P002 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004017 adenylate kinase activity IEP Neighborhood
MF GO:0004089 carbonate dehydratase activity IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0006073 cellular glucan metabolic process IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006904 vesicle docking involved in exocytosis IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008194 UDP-glycosyltransferase activity IEP Neighborhood
BP GO:0009058 biosynthetic process IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
BP GO:0009250 glucan biosynthetic process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
BP GO:0016051 carbohydrate biosynthetic process IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016567 protein ubiquitination IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016759 cellulose synthase activity IEP Neighborhood
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Neighborhood
MF GO:0016776 phosphotransferase activity, phosphate group as acceptor IEP Neighborhood
MF GO:0016836 hydro-lyase activity IEP Neighborhood
MF GO:0019205 nucleobase-containing compound kinase activity IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
BP GO:0022406 membrane docking IEP Neighborhood
BP GO:0030243 cellulose metabolic process IEP Neighborhood
BP GO:0030244 cellulose biosynthetic process IEP Neighborhood
BP GO:0032446 protein modification by small protein conjugation IEP Neighborhood
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Neighborhood
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
MF GO:0035251 UDP-glucosyltransferase activity IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0044042 glucan metabolic process IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044249 cellular biosynthetic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
MF GO:0046527 glucosyltransferase activity IEP Neighborhood
BP GO:0048278 vesicle docking IEP Neighborhood
MF GO:0050145 nucleoside monophosphate kinase activity IEP Neighborhood
BP GO:0051273 beta-glucan metabolic process IEP Neighborhood
BP GO:0051274 beta-glucan biosynthetic process IEP Neighborhood
BP GO:0051640 organelle localization IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:0140029 exocytic process IEP Neighborhood
BP GO:0140056 organelle localization by membrane tethering IEP Neighborhood
BP GO:1901576 organic substance biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001005 SANT/Myb 69 111
IPR001005 SANT/Myb 14 62
No external refs found!