Description : Cell wall.pectin.modification and degradation.pectate lyase
Gene families : OG0000134 (Archaeplastida) Phylogenetic Tree(s): OG0000134_tree ,
OG_05_0114796 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0093046 (SeedPlants) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: GSVIVT01033671001 | |
Cluster | HCCA: Cluster_133 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00004p00123190 | evm_27.TU.AmTr_v1... | Cell wall.pectin.modification and degradation.pectate lyase | 0.02 | Archaeplastida | |
AMTR_s00014p00175040 | evm_27.TU.AmTr_v1... | Putative pectate lyase 2 OS=Arabidopsis thaliana | 0.04 | Archaeplastida | |
AMTR_s00039p00189000 | evm_27.TU.AmTr_v1... | Cell wall.pectin.modification and degradation.pectate lyase | 0.05 | Archaeplastida | |
AMTR_s00120p00111300 | evm_27.TU.AmTr_v1... | Cell wall.pectin.modification and degradation.pectate lyase | 0.03 | Archaeplastida | |
AT1G04680 | No alias | Pectin lyase-like superfamily protein | 0.03 | Archaeplastida | |
AT1G11920 | No alias | Pectin lyase-like superfamily protein | 0.04 | Archaeplastida | |
AT3G27400 | No alias | Pectin lyase-like superfamily protein | 0.06 | Archaeplastida | |
AT3G53190 | No alias | Pectin lyase-like superfamily protein | 0.04 | Archaeplastida | |
AT4G22080 | RHS14 | root hair specific 14 | 0.02 | Archaeplastida | |
AT4G24780 | No alias | Pectin lyase-like superfamily protein | 0.05 | Archaeplastida | |
GSVIVT01016209001 | No alias | Cell wall.pectin.modification and degradation.pectate lyase | 0.07 | Archaeplastida | |
LOC_Os04g05050.1 | No alias | pectate lyase | 0.03 | Archaeplastida | |
LOC_Os10g31910.1 | No alias | pectate lyase | 0.05 | Archaeplastida | |
MA_10437227g0010 | No alias | pectate lyase | 0.04 | Archaeplastida | |
Pp3c14_6710V3.1 | No alias | Pectin lyase-like superfamily protein | 0.02 | Archaeplastida | |
Pp3c17_16370V3.1 | No alias | Pectin lyase-like superfamily protein | 0.06 | Archaeplastida | |
Pp3c1_33130V3.1 | No alias | Pectin lyase-like superfamily protein | 0.03 | Archaeplastida | |
Pp3c1_4040V3.1 | No alias | Pectin lyase-like superfamily protein | 0.04 | Archaeplastida | |
Pp3c3_20320V3.1 | No alias | Pectin lyase-like superfamily protein | 0.03 | Archaeplastida | |
Pp3c3_35190V3.1 | No alias | Pectin lyase-like superfamily protein | 0.03 | Archaeplastida | |
Solyc02g080910.4.1 | No alias | pectate lyase | 0.02 | Archaeplastida | |
Solyc03g058890.4.1 | No alias | pectate lyase | 0.02 | Archaeplastida | |
Solyc03g071570.3.1 | No alias | pectate lyase | 0.03 | Archaeplastida | |
Solyc05g007080.4.1 | No alias | pectate lyase | 0.02 | Archaeplastida | |
Zm00001e004654_P002 | No alias | pectate lyase | 0.04 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0009055 | electron transfer activity | IEP | Neighborhood |
MF | GO:0015035 | protein disulfide oxidoreductase activity | IEP | Neighborhood |
MF | GO:0015036 | disulfide oxidoreductase activity | IEP | Neighborhood |
MF | GO:0016667 | oxidoreductase activity, acting on a sulfur group of donors | IEP | Neighborhood |
BP | GO:0019725 | cellular homeostasis | IEP | Neighborhood |
BP | GO:0042592 | homeostatic process | IEP | Neighborhood |
BP | GO:0045454 | cell redox homeostasis | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002022 | Pec_lyase | 157 | 275 |
No external refs found! |