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  5. GSVIVT01033678001

GSVIVT01033678001


Description : RNA biosynthesis.transcriptional activation.C2H2 zinc finger transcription factor


Gene families : OG0000103 (Archaeplastida) Phylogenetic Tree(s): OG0000103_tree ,
OG_05_0000039 (LandPlants) Phylogenetic Tree(s): OG_05_0000039_tree ,
OG_06_0000107 (SeedPlants) Phylogenetic Tree(s): OG_06_0000107_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01033678001
Cluster HCCA: Cluster_17

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00102p00073930 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 Archaeplastida
AT1G27730 ZAT10, STZ salt tolerance zinc finger 0.03 Archaeplastida
AT2G26940 No alias C2H2-type zinc finger family protein 0.03 Archaeplastida
AT2G37430 No alias C2H2 and C2HC zinc fingers superfamily protein 0.04 Archaeplastida
AT3G46090 ZAT7 C2H2 and C2HC zinc fingers superfamily protein 0.04 Archaeplastida
AT3G60580 No alias C2H2-like zinc finger protein 0.03 Archaeplastida
AT5G67450 AZF1, ZF1 zinc-finger protein 1 0.03 Archaeplastida
GSVIVT01037851001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 Archaeplastida
Gb_40151 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
LOC_Os03g55540.1 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
LOC_Os03g60560.1 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
MA_10426425g0010 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
MA_167434g0010 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
MA_23050g0010 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
MA_5277601g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_858691g0010 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Solyc01g090840.3.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Solyc01g107170.2.1 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Solyc05g054650.1.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Solyc06g060740.3.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Solyc06g075775.1.1 No alias C2H2 zinc finger transcription factor 0.05 Archaeplastida
Zm00001e002063_P001 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Zm00001e003057_P001 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Zm00001e003413_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e005777_P001 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Zm00001e006181_P001 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Zm00001e006184_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e011983_P001 No alias C2H2 zinc finger transcription factor 0.06 Archaeplastida
Zm00001e019349_P001 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Zm00001e023172_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e024331_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e028782_P001 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Zm00001e038072_P001 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Zm00001e038074_P001 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Zm00001e038464_P001 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005576 extracellular region IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
BP GO:0015031 protein transport IEP Neighborhood
BP GO:0015833 peptide transport IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
CC GO:0030117 membrane coat IEP Neighborhood
CC GO:0030118 clathrin coat IEP Neighborhood
CC GO:0030120 vesicle coat IEP Neighborhood
CC GO:0030125 clathrin vesicle coat IEP Neighborhood
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP Neighborhood
CC GO:0030132 clathrin coat of coated pit IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
BP GO:0033036 macromolecule localization IEP Neighborhood
BP GO:0042886 amide transport IEP Neighborhood
CC GO:0044431 Golgi apparatus part IEP Neighborhood
CC GO:0044433 cytoplasmic vesicle part IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
CC GO:0098797 plasma membrane protein complex IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!