GSVIVT01033767001


Description : Cell wall.hemicellulose.heteromannan.synthesis.mannan synthase activities.CSLA-type mannan synthase


Gene families : OG0000194 (Archaeplastida) Phylogenetic Tree(s): OG0000194_tree ,
OG_05_0000992 (LandPlants) Phylogenetic Tree(s): OG_05_0000992_tree ,
OG_06_0000659 (SeedPlants) Phylogenetic Tree(s): OG_06_0000659_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01033767001
Cluster HCCA: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00171550 evm_27.TU.AmTr_v1... Cell wall.hemicellulose.xyloglucan.synthesis.CSLC-type... 0.04 Archaeplastida
AT1G23480 ATCSLA3, CSLA03,... cellulose synthase-like A3 0.04 Archaeplastida
AT2G35650 CSLA07,... cellulose synthase like 0.07 Archaeplastida
AT3G28180 ATCSLC04,... Cellulose-synthase-like C4 0.08 Archaeplastida
AT4G31590 ATCSLC05,... Cellulose-synthase-like C5 0.05 Archaeplastida
GSVIVT01009290001 No alias Cell wall.hemicellulose.xyloglucan.synthesis.CSLC-type... 0.07 Archaeplastida
Gb_05418 No alias 1,4-beta-glucan synthase (CSLC) 0.05 Archaeplastida
Gb_24488 No alias 1,4-beta-glucan synthase (CSLC) 0.03 Archaeplastida
Gb_27616 No alias Enzyme classification.EC_2 transferases.EC_2.4... 0.1 Archaeplastida
Gb_35783 No alias 1,4-beta-glucan synthase (CSLC) 0.03 Archaeplastida
LOC_Os02g09930.1 No alias mannan synthase (CSLA) 0.02 Archaeplastida
LOC_Os05g43530.1 No alias 1,4-beta-glucan synthase (CSLC) 0.08 Archaeplastida
MA_10429365g0010 No alias 1,4-beta-glucan synthase (CSLC) 0.05 Archaeplastida
MA_10431741g0020 No alias 1,4-beta-glucan synthase (CSLC) 0.04 Archaeplastida
MA_449559g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_712121g0010 No alias Probable xyloglucan glycosyltransferase 9 OS=Oryza... 0.03 Archaeplastida
MA_7990944g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_9381137g0010 No alias Probable xyloglucan glycosyltransferase 2 OS=Oryza... 0.07 Archaeplastida
Mp1g22770.1 No alias mannan synthase (CSLA) 0.04 Archaeplastida
Pp3c14_13750V3.1 No alias Nucleotide-diphospho-sugar transferases superfamily protein 0.02 Archaeplastida
Pp3c15_20570V3.1 No alias Glycosyl transferase family 2 protein 0.04 Archaeplastida
Pp3c17_19670V3.1 No alias Nucleotide-diphospho-sugar transferases superfamily protein 0.03 Archaeplastida
Smo230176 No alias Cell wall.hemicellulose.heteromannan.synthesis.mannan... 0.06 Archaeplastida
Solyc02g089640.3.1 No alias 1,4-beta-glucan synthase (CSLC) 0.04 Archaeplastida
Solyc04g077470.3.1 No alias 1,4-beta-glucan synthase (CSLC) 0.04 Archaeplastida
Solyc05g055410.3.1 No alias mannan synthase (CSLA) 0.04 Archaeplastida
Solyc08g006310.3.1 No alias 1,4-beta-glucan synthase (CSLC) 0.05 Archaeplastida
Solyc10g083670.3.1 No alias mannan synthase (CSLA) 0.07 Archaeplastida
Solyc11g066820.2.1 No alias mannan synthase (CSLA) 0.07 Archaeplastida
Solyc12g088240.2.1 No alias 1,4-beta-glucan synthase (CSLC) 0.06 Archaeplastida
Zm00001e015809_P002 No alias mannan synthase (CSLA) 0.02 Archaeplastida
Zm00001e020029_P001 No alias mannan synthase (CSLA) 0.03 Archaeplastida
Zm00001e025054_P003 No alias mannan synthase (CSLA) 0.04 Archaeplastida
Zm00001e037543_P001 No alias mannan synthase (CSLA) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Neighborhood
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003924 GTPase activity IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
BP GO:0009143 nucleoside triphosphate catabolic process IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0016831 carboxy-lyase activity IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
MF GO:0030247 polysaccharide binding IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
MF GO:0047429 nucleoside-triphosphate diphosphatase activity IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!