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Description : RNA biosynthesis.transcriptional activation.Trihelix transcription factor
Gene families : OG0000662 (Archaeplastida) Phylogenetic Tree(s): OG0000662_tree ,
OG_05_0000467 (LandPlants) Phylogenetic Tree(s): OG_05_0000467_tree ,
OG_06_0008611 (SeedPlants) Phylogenetic Tree(s): OG_06_0008611_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: GSVIVT01033792001 | |
| Cluster | HCCA: Cluster_234 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00040p00200990 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.Trihelix... | 0.05 | Archaeplastida | |
| AMTR_s00041p00147950 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.Trihelix... | 0.05 | Archaeplastida | |
| AT1G33240 | AT-GTL1, GTL1, AT-GTL2 | GT-2-like 1 | 0.03 | Archaeplastida | |
| AT1G76880 | No alias | Duplicated homeodomain-like superfamily protein | 0.03 | Archaeplastida | |
| AT1G76890 | AT-GT2, GT2 | No description available | 0.04 | Archaeplastida | |
| AT3G10000 | EDA31 | Homeodomain-like superfamily protein | 0.05 | Archaeplastida | |
| AT5G03680 | PTL | Duplicated homeodomain-like superfamily protein | 0.04 | Archaeplastida | |
| Gb_31300 | No alias | transcription factor (Trihelix) | 0.06 | Archaeplastida | |
| Gb_32610 | No alias | transcription factor (Trihelix) | 0.03 | Archaeplastida | |
| LOC_Os02g01380.1 | No alias | transcription factor (Trihelix) | 0.03 | Archaeplastida | |
| LOC_Os04g45750.1 | No alias | transcription factor (Trihelix) | 0.06 | Archaeplastida | |
| MA_10291373g0010 | No alias | no hits & (original description: none) | 0.02 | Archaeplastida | |
| MA_10427500g0030 | No alias | Trihelix transcription factor GTL1 OS=Arabidopsis... | 0.03 | Archaeplastida | |
| MA_47951g0010 | No alias | transcription factor (Trihelix) | 0.04 | Archaeplastida | |
| Pp3c18_11190V3.1 | No alias | Duplicated homeodomain-like superfamily protein | 0.04 | Archaeplastida | |
| Solyc09g009250.3.1 | No alias | transcription factor (Trihelix) | 0.04 | Archaeplastida | |
| Solyc11g005380.2.1 | No alias | transcription factor (Trihelix) | 0.03 | Archaeplastida | |
| Zm00001e007383_P001 | No alias | transcription factor (Trihelix) | 0.04 | Archaeplastida | |
| Zm00001e041338_P003 | No alias | transcription factor (Trihelix) | 0.03 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
| MF | GO:0003677 | DNA binding | IEP | Neighborhood |
| MF | GO:0004888 | transmembrane signaling receptor activity | IEP | Neighborhood |
| MF | GO:0004970 | ionotropic glutamate receptor activity | IEP | Neighborhood |
| MF | GO:0005230 | extracellular ligand-gated ion channel activity | IEP | Neighborhood |
| MF | GO:0005488 | binding | IEP | Neighborhood |
| BP | GO:0006355 | regulation of transcription, DNA-templated | IEP | Neighborhood |
| BP | GO:0006576 | cellular biogenic amine metabolic process | IEP | Neighborhood |
| MF | GO:0008066 | glutamate receptor activity | IEP | Neighborhood |
| BP | GO:0009116 | nucleoside metabolic process | IEP | Neighborhood |
| BP | GO:0009308 | amine metabolic process | IEP | Neighborhood |
| BP | GO:0009309 | amine biosynthetic process | IEP | Neighborhood |
| BP | GO:0009719 | response to endogenous stimulus | IEP | Neighborhood |
| BP | GO:0009725 | response to hormone | IEP | Neighborhood |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | Neighborhood |
| BP | GO:0010033 | response to organic substance | IEP | Neighborhood |
| BP | GO:0010468 | regulation of gene expression | IEP | Neighborhood |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | Neighborhood |
| MF | GO:0015276 | ligand-gated ion channel activity | IEP | Neighborhood |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0019222 | regulation of metabolic process | IEP | Neighborhood |
| MF | GO:0022824 | transmitter-gated ion channel activity | IEP | Neighborhood |
| MF | GO:0022834 | ligand-gated channel activity | IEP | Neighborhood |
| MF | GO:0022835 | transmitter-gated channel activity | IEP | Neighborhood |
| MF | GO:0030410 | nicotianamine synthase activity | IEP | Neighborhood |
| BP | GO:0030417 | nicotianamine metabolic process | IEP | Neighborhood |
| BP | GO:0030418 | nicotianamine biosynthetic process | IEP | Neighborhood |
| MF | GO:0030594 | neurotransmitter receptor activity | IEP | Neighborhood |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | Neighborhood |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | Neighborhood |
| MF | GO:0038023 | signaling receptor activity | IEP | Neighborhood |
| BP | GO:0042221 | response to chemical | IEP | Neighborhood |
| BP | GO:0042401 | cellular biogenic amine biosynthetic process | IEP | Neighborhood |
| BP | GO:0044106 | cellular amine metabolic process | IEP | Neighborhood |
| BP | GO:0050789 | regulation of biological process | IEP | Neighborhood |
| BP | GO:0050794 | regulation of cellular process | IEP | Neighborhood |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | Neighborhood |
| MF | GO:0060089 | molecular transducer activity | IEP | Neighborhood |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | Neighborhood |
| BP | GO:0065007 | biological regulation | IEP | Neighborhood |
| BP | GO:0072350 | tricarboxylic acid metabolic process | IEP | Neighborhood |
| BP | GO:0072351 | tricarboxylic acid biosynthetic process | IEP | Neighborhood |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | Neighborhood |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Neighborhood |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Neighborhood |
| BP | GO:1901657 | glycosyl compound metabolic process | IEP | Neighborhood |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | Neighborhood |
| BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | Neighborhood |
No InterPro domains available for this sequence
| No external refs found! |