GSVIVT01033792001


Description : RNA biosynthesis.transcriptional activation.Trihelix transcription factor


Gene families : OG0000662 (Archaeplastida) Phylogenetic Tree(s): OG0000662_tree ,
OG_05_0000467 (LandPlants) Phylogenetic Tree(s): OG_05_0000467_tree ,
OG_06_0008611 (SeedPlants) Phylogenetic Tree(s): OG_06_0008611_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01033792001
Cluster HCCA: Cluster_234

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00040p00200990 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.Trihelix... 0.05 Archaeplastida
AMTR_s00041p00147950 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.Trihelix... 0.05 Archaeplastida
AT1G33240 AT-GTL1, GTL1, AT-GTL2 GT-2-like 1 0.03 Archaeplastida
AT1G76880 No alias Duplicated homeodomain-like superfamily protein 0.03 Archaeplastida
AT1G76890 AT-GT2, GT2 No description available 0.04 Archaeplastida
AT3G10000 EDA31 Homeodomain-like superfamily protein 0.05 Archaeplastida
AT5G03680 PTL Duplicated homeodomain-like superfamily protein 0.04 Archaeplastida
Gb_31300 No alias transcription factor (Trihelix) 0.06 Archaeplastida
Gb_32610 No alias transcription factor (Trihelix) 0.03 Archaeplastida
LOC_Os02g01380.1 No alias transcription factor (Trihelix) 0.03 Archaeplastida
LOC_Os04g45750.1 No alias transcription factor (Trihelix) 0.06 Archaeplastida
MA_10291373g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_10427500g0030 No alias Trihelix transcription factor GTL1 OS=Arabidopsis... 0.03 Archaeplastida
MA_47951g0010 No alias transcription factor (Trihelix) 0.04 Archaeplastida
Pp3c18_11190V3.1 No alias Duplicated homeodomain-like superfamily protein 0.04 Archaeplastida
Solyc09g009250.3.1 No alias transcription factor (Trihelix) 0.04 Archaeplastida
Solyc11g005380.2.1 No alias transcription factor (Trihelix) 0.03 Archaeplastida
Zm00001e007383_P001 No alias transcription factor (Trihelix) 0.04 Archaeplastida
Zm00001e041338_P003 No alias transcription factor (Trihelix) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0004888 transmembrane signaling receptor activity IEP Neighborhood
MF GO:0004970 ionotropic glutamate receptor activity IEP Neighborhood
MF GO:0005230 extracellular ligand-gated ion channel activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006576 cellular biogenic amine metabolic process IEP Neighborhood
MF GO:0008066 glutamate receptor activity IEP Neighborhood
BP GO:0009116 nucleoside metabolic process IEP Neighborhood
BP GO:0009308 amine metabolic process IEP Neighborhood
BP GO:0009309 amine biosynthetic process IEP Neighborhood
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0015276 ligand-gated ion channel activity IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
MF GO:0022824 transmitter-gated ion channel activity IEP Neighborhood
MF GO:0022834 ligand-gated channel activity IEP Neighborhood
MF GO:0022835 transmitter-gated channel activity IEP Neighborhood
MF GO:0030410 nicotianamine synthase activity IEP Neighborhood
BP GO:0030417 nicotianamine metabolic process IEP Neighborhood
BP GO:0030418 nicotianamine biosynthetic process IEP Neighborhood
MF GO:0030594 neurotransmitter receptor activity IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
MF GO:0038023 signaling receptor activity IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
BP GO:0042401 cellular biogenic amine biosynthetic process IEP Neighborhood
BP GO:0044106 cellular amine metabolic process IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
MF GO:0060089 molecular transducer activity IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0072350 tricarboxylic acid metabolic process IEP Neighborhood
BP GO:0072351 tricarboxylic acid biosynthetic process IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1901657 glycosyl compound metabolic process IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!