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  5. GSVIVT01034028001

GSVIVT01034028001


Description : RNA biosynthesis.organelle machineries.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.essentiell co-factors.PAP6/FLN1 component


Gene families : OG0000505 (Archaeplastida) Phylogenetic Tree(s): OG0000505_tree ,
OG_05_0006095 (LandPlants) Phylogenetic Tree(s): OG_05_0006095_tree ,
OG_06_0009885 (SeedPlants) Phylogenetic Tree(s): OG_06_0009885_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01034028001
Cluster HCCA: Cluster_170

Target Alias Description ECC score Gene Family Method Actions
AT1G66430 No alias pfkB-like carbohydrate kinase family protein 0.02 Archaeplastida
GSVIVT01030838001 No alias Carbohydrate metabolism.sucrose... 0.02 Archaeplastida
Gb_14191 No alias fructose kinase 0.02 Archaeplastida
Gb_27281 No alias fructose kinase 0.03 Archaeplastida
MA_74741g0010 No alias fructose kinase 0.02 Archaeplastida
Solyc11g042850.2.1 No alias fructose kinase 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004252 serine-type endopeptidase activity IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
InterPro domains Description Start Stop
IPR006917 SOUL_haem-bd 10 90
IPR006917 SOUL_haem-bd 100 151
IPR011611 PfkB_dom 348 643
No external refs found!