GSVIVT01034134001


Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.RING-domain E3 ligase activities.RING-H2-type E3 ligase


Gene families : OG0000041 (Archaeplastida) Phylogenetic Tree(s): OG0000041_tree ,
OG_05_0004757 (LandPlants) Phylogenetic Tree(s): OG_05_0004757_tree ,
OG_06_0002639 (SeedPlants) Phylogenetic Tree(s): OG_06_0002639_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01034134001
Cluster HCCA: Cluster_163

Target Alias Description ECC score Gene Family Method Actions
AT3G51325 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT3G60080 No alias RING/U-box superfamily protein 0.02 Archaeplastida
AT5G64920 CIP8 COP1-interacting protein 8 0.02 Archaeplastida
Gb_11308 No alias no hits & (original description: none) 0.03 Archaeplastida
Gb_38252 No alias E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis... 0.03 Archaeplastida
LOC_Os06g08250.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Mp5g05250.1 No alias AIP2 signal transducer of abscisic acid perception 0.03 Archaeplastida
Solyc01g104260.3.1 No alias Probable E3 ubiquitin-protein ligase RHC1A... 0.04 Archaeplastida
Solyc04g011610.3.1 No alias E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis... 0.02 Archaeplastida
Solyc09g074460.3.1 No alias E3 ubiquitin-protein ligase CIP8 OS=Arabidopsis thaliana... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0061630 ubiquitin protein ligase activity IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004476 mannose-6-phosphate isomerase activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0005102 signaling receptor binding IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0007186 G-protein coupled receptor signaling pathway IEP Neighborhood
BP GO:0007275 multicellular organism development IEP Neighborhood
MF GO:0008083 growth factor activity IEP Neighborhood
MF GO:0008134 transcription factor binding IEP Neighborhood
BP GO:0008283 cell proliferation IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0016860 intramolecular oxidoreductase activity IEP Neighborhood
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Neighborhood
MF GO:0017025 TBP-class protein binding IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
MF GO:0030545 receptor regulator activity IEP Neighborhood
BP GO:0032501 multicellular organismal process IEP Neighborhood
BP GO:0032502 developmental process IEP Neighborhood
MF GO:0048018 receptor ligand activity IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
BP GO:0048856 anatomical structure development IEP Neighborhood
InterPro domains Description Start Stop
IPR001841 Znf_RING 326 368
IPR010543 DUF1117 371 453
No external refs found!